Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01086 and BPUM_0544
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:42
# Commandline: needle
# -asequence dna-align/BSNT_01086___yeaB.1.24716.seq
# -bsequence dna-align/BPUM_0544___yeaB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01086___yeaB-BPUM_0544___yeaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01086___yeaB-BPUM_0544___yeaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01086___yeaB
# 2: BPUM_0544___yeaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 923
# Identity: 639/923 (69.2%)
# Similarity: 639/923 (69.2%)
# Gaps: 73/923 ( 7.9%)
# Score: 2127.0
#
#
#=======================================
BSNT_01086___ 1 ATGGAGAGATATGATGAATTGAAAAAGGGTGAATCCGGGGCGCTGGT--- 47
||||||.|.|||.|.|||||.|.|.|.||||||.|.||.||...|||
BPUM_0544___y 1 ATGGAGCGCTATAACGAATTAAGACAAGGTGAAACAGGTGCTTGGGTTAG 50
BSNT_01086___ 48 CAGCATTGCCGCGTATCTTGTTCTT-TCCGCAATTAAACTGATCATCGGT 96
||.||||||| ||| .||.|||| ||.||..|.|||||..|.||.||.
BPUM_0544___y 51 CATCATTGCC---TAT-GTGATCTTATCTGCGGTGAAACTTCTGATTGGG 96
BSNT_01086___ 97 TATCTTTTTCACTCGGAAGCACTTACGGCAGACGGGTTAAATAACACAAC 146
|||...|||||.||.||.||.|||.|||||||.||.||.|||||.||.||
BPUM_0544___y 97 TATACGTTTCATTCAGAGGCGCTTTCGGCAGATGGATTGAATAATACGAC 146
BSNT_01086___ 147 TGACATTATTGCTTCTGCTGCTGTGCTGATTGGCCTGCGCATCTCTCAAA 196
.||.||||||||.|||..|||.|||.|||||||.||.||.||.|||||||
BPUM_0544___y 147 GGATATTATTGCATCTCTTGCAGTGTTGATTGGACTTCGTATTTCTCAAA 196
BSNT_01086___ 197 AGCCTCCTGACGAAGATCATCCATACGGCCACTTCCGAGCGGA-AACGAT 245
||||.|||||.|||||||||||||||||.||.||..||||.|| ||| ||
BPUM_0544___y 197 AGCCGCCTGATGAAGATCATCCATACGGTCATTTTAGAGCAGAGAAC-AT 245
BSNT_01086___ 246 TGCATCGCTTATCGCATCGTTTATTATGATGGTTGTCGGACTGCAAGTGC 295
|||.||.|||.|.||.||.||||||||||||.||||.|||||.||.||..
BPUM_0544___y 246 TGCGTCTCTTGTGGCGTCCTTTATTATGATGCTTGTTGGACTTCAGGTTT 295
BSNT_01086___ 296 TGTTCAGCGCCGGAGAATCTATTTTTTCTGCTAAACAAGAGACGCCGGAT 345
||.|.||.||.||..|.||..|.||.||..|..|.||..|.|||||.|||
BPUM_0544___y 296 TGCTGAGTGCAGGCCAGTCGCTCTTCTCATCAGAGCATCAAACGCCTGAT 345
BSNT_01086___ 346 ATGATTGCGGCTTGGACGGCAGCGGGCGGGGCAGTCCTGATG-CTGATCG 394
|||||.||.||||||||||||||.||..|.||.||..||||| .||.| |
BPUM_0544___y 346 ATGATCGCAGCTTGGACGGCAGCAGGAAGTGCTGTGGTGATGTATGGT-G 394
BSNT_01086___ 395 TTTATCGGTACAA---TAAAAGGCTGGCCAAAAAGGTGAAGAGCCAGGCG 441
|.|||...||||| ||| .|||.|||||..|.|.||.||||||||.
BPUM_0544___y 395 TGTATATTTACAACCGTAA---TCTGTCCAAACGGATCAATAGCCAGGCT 441
BSNT_01086___ 442 CTCCTTGCTGCGGCTGCTGATAATAAATCAGACGCATTGGTCAGTATCGG 491
||.|.|||.||.||.|||||||||||||||||.||.|..||.||||||||
BPUM_0544___y 442 CTTCATGCAGCAGCAGCTGATAATAAATCAGATGCGTATGTGAGTATCGG 491
BSNT_01086___ 492 CACGTTTATCGGCATTGTGGCTGCTCAATTCCATCTTGCTTGGATTGATA 541
.||.|||.|.||.|||.|.||..|||||||.||.||.||.||||||||||
BPUM_0544___y 492 AACATTTGTAGGGATTATCGCCTCTCAATTTCAGCTGGCATGGATTGATA 541
BSNT_01086___ 542 CGGTCACT----GCGTTTGTGATCGGCCTGCTTATTTGCAAGACCGCATG 587
|||| ||||||||.||.||.||..|||||||.||.||.||.||
BPUM_0544___y 542 ----CACTTGCAGCGTTTGTTATTGGACTCATTATTTGTAAAACGGCGTG 587
BSNT_01086___ 588 GGATATTTTTAAAGAATCATCTCACTCTTTGACAGATGGATTCGACACAA 637
|||.|||||.|.|||..|.|||||.||.||.||.|||||.||..|.|.||
BPUM_0544___y 588 GGAGATTTTCAGAGATGCTTCTCATTCGTTAACGGATGGTTTTCATATAA 637
BSNT_01086___ 638 AGGACATTTCCGCTTATAAACAGACAATCGAA--AAAATCTCCGGTGTGA 685
|.||.||.|||...||||||.||||.||.||| ||.|.|| ||.|||.
BPUM_0544___y 638 AAGATATGTCCAAATATAAAGAGACCATTGAAGCAACACCT--GGGGTGG 685
BSNT_01086___ 686 GCCGTTTAAAAGACATAAAAGCAAGATACTTGGGCAGTACGGTTCATGTT 735
||..|||.|||||.||.||.|||.|.||..|.||.||||||.|.|||||.
BPUM_0544___y 686 GCGATTTGAAAGATATTAAGGCACGCTATCTCGGAAGTACGATCCATGTG 735
BSNT_01086___ 736 GATGTGGTGGTTGAGGT--ATCGGCAGATTTAAATATTACGGAAAGCCAC 783
|||||.||.||.||||| |.|.|| |.||.||.|||.|.||||||||.
BPUM_0544___y 736 GATGTAGTAGTGGAGGTCGAGCCGC--ACTTGAACATTGCAGAAAGCCAT 783
BSNT_01086___ 784 GATATAGCCAATGAAATTGAGCGGAGAATGAAGGAGGAGCATGCGATTGA 833
|||||.||..||||.|||||.||.|||||||||.||||.||||..|||
BPUM_0544___y 784 GATATTGCAGATGAGATTGAACGTAGAATGAAGAAGGAACATGATATT-- 831
BSNT_01086___ 834 TT--ATTCGCATGTTCATATGGAGCCTTTAGAA-------CACAAATAA- 873
|| ||||.||||||||||||||||| ||.| || |||.||
BPUM_0544___y 832 TTACATTCTCATGTTCATATGGAGCC---AGCAGGTGAGCCA-AAAGAAG 877
BSNT_01086___ 873 ----------------------- 873
BPUM_0544___y 878 AGAAGAAGTCTTTTCCATCGTGA 900
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