Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01047 and BPUM_0534

See Amino acid alignment / Visit BSNT_01047 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:41
# Commandline: needle
#    -asequence dna-align/BSNT_01047___groES.1.24716.seq
#    -bsequence dna-align/BPUM_0534___groES.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01047___groES-BPUM_0534___groES.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01047___groES-BPUM_0534___groES.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01047___groES
# 2: BPUM_0534___groES
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     250/286 (87.4%)
# Similarity:   250/286 (87.4%)
# Gaps:           2/286 ( 0.7%)
# Score: 1094.0
# 
#
#=======================================

BSNT_01047___      1 TTGTTAAAGCCATTAGGTGATCGCGTTGTCATTGAACTCGTAGAATCTGA     50
                     .||||||||||||||||.||||||||..|||||||||||||.||||||||
BPUM_0534___g      1 ATGTTAAAGCCATTAGGCGATCGCGTAATCATTGAACTCGTTGAATCTGA     50

BSNT_01047___     51 AGAAAAAACTGCCAGCGGAATTGTGTTGCCGGATTCTGCAAAAGAAAAAC    100
                     .||||||||.||.|||||.||||||||.||||||||||||||||||||||
BPUM_0534___g     51 GGAAAAAACCGCTAGCGGTATTGTGTTACCGGATTCTGCAAAAGAAAAAC    100

BSNT_01047___    101 CGCAAGAAGGCAAAATCGTGGCAGCTGGTTCAGGTCGCGTGTTAGAAAGC    150
                     ||||||||||.|||||.||.|||||.|||||||||||.||..|.|||||.
BPUM_0534___g    101 CGCAAGAAGGTAAAATTGTTGCAGCAGGTTCAGGTCGTGTACTTGAAAGT    150

BSNT_01047___    151 GGAGAGCGCGTTGCTTTAGAAGTAAA-AGAGGGCGACCGCATTATCTTCT    199
                     ||.|||||||||||.||||||||||| |.| |||||||||||||||||||
BPUM_0534___g    151 GGTGAGCGCGTTGCGTTAGAAGTAAACACA-GGCGACCGCATTATCTTCT    199

BSNT_01047___    200 CAAAATACGCAGGTACTGAAGTGAAATACGAAGGTACTGAATACTTAATC    249
                     |||||||.|||||.||||||||||||||.|||||.|..|||||.||||||
BPUM_0534___g    200 CAAAATATGCAGGCACTGAAGTGAAATATGAAGGCAAAGAATATTTAATC    249

BSNT_01047___    250 TTACGTGAAAGCGACATTTTAGCTGTTATCGGCTAA    285
                     .|.|||||.||||||||||||||||||||.||.|||
BPUM_0534___g    250 CTTCGTGAGAGCGACATTTTAGCTGTTATTGGTTAA    285


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