Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01038 and BPUM_0527

See Amino acid alignment / Visit BSNT_01038 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:41
# Commandline: needle
#    -asequence dna-align/BSNT_01038___moaC.1.24716.seq
#    -bsequence dna-align/BPUM_0527___moaC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01038___moaC-BPUM_0527___moaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01038___moaC-BPUM_0527___moaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01038___moaC
# 2: BPUM_0527___moaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 551
# Identity:     370/551 (67.2%)
# Similarity:   370/551 (67.2%)
# Gaps:          67/551 (12.2%)
# Score: 1328.0
# 
#
#=======================================

BSNT_01038___      1 GTGTATGATCTGTTTAAGGAGCGTTTTAATATGAATGGATTTTCTCATTT     50
                                                   ||||.|..||||...||.||
BPUM_0527___m      1 ------------------------------ATGAGTCAATTTAGCCACTT     20

BSNT_01038___     51 TAATGAACAGGGCAGAGCCCAGATGGTGGATATTAGCGAAAAATCTTCGA    100
                     |||.|||||.||.|||||..|||||||.||.|||||.||.|||||.||.|
BPUM_0527___m     21 TAACGAACAAGGAAGAGCAAAGATGGTCGACATTAGTGACAAATCATCTA     70

BSNT_01038___    101 CTGTCCGTACTGCGGCGGCTGTTTCAAGCGTACACATGAAGAATGAGGTG    150
                     ||.|..|.||.||.|..||||.||||||.||.|..||||..||.||.|||
BPUM_0527___m     71 CTATGAGAACGGCTGTTGCTGCTTCAAGTGTTCGTATGATAAAAGAAGTG    120

BSNT_01038___    151 TACGAGAAAATACAGAGTCATGATATCGGCAAAGGAGATGTACTGGCTGT    200
                     |...|.||||||.||...|.|||.||.||.|||||.|||||.|||.||||
BPUM_0527___m    121 TTTCATAAAATAGAGCAACGTGAAATTGGAAAAGGGGATGTGCTGTCTGT    170

BSNT_01038___    201 CGCACAGGTGGCAGGCATTATGGCCGCAAAGCAAACGTCGAATATCATTC    250
                     .||||||||.||.|||||||||||.|||||||||||.||.|..||.||||
BPUM_0527___m    171 TGCACAGGTTGCTGGCATTATGGCAGCAAAGCAAACATCTACCATTATTC    220

BSNT_01038___    251 CGATGTGCCATCCGCTTTCATTGAGCGGGGTAGATATATCGTTTGACTGG    300
                     |.|||||.|||||||||.||||.|..||.||.|||||.||.|||||.|||
BPUM_0527___m    221 CAATGTGTCATCCGCTTGCATTAAAAGGAGTGGATATCTCCTTTGATTGG    270

BSNT_01038___    301 AAAATAAAAGAAG-CAGAAGT-----TATACTTCATATAAAAGCACAGGT    344
                           .|.|||| |.|||.|     .||.||..|.|||.|||.||||||
BPUM_0527___m    271 ------GAGGAAGACGGAAATGCGCACATTCTGAACATACAAGTACAGGT    314

BSNT_01038___    345 CAAAACGAAAGGGAGTACAGGTGTGGAAATGGAAGCGCTCACTTCTGCAT    394
                     .|||||.|||||.|||||.||||||||.||||||||||||||.|||||.|
BPUM_0527___m    315 GAAAACAAAAGGAAGTACGGGTGTGGAGATGGAAGCGCTCACCTCTGCTT    364

BSNT_01038___    395 CGGTGTGCGCTCTTACCGTTTACGATATGTGCAAGGCCCTTGATAAGGGG    444
                     |.||.||.||.||.|||||||||||.||||||||.||..|||||||.||.
BPUM_0527___m    365 CAGTATGTGCACTGACCGTTTACGACATGTGCAAAGCGATTGATAAAGGC    414

BSNT_01038___    445 ATGGTCATCGGCCCTACTTTCTTGCTGGAGAAGACAGGCGGGAAAAACGG    494
                     |||.|||||||.|||||.|..||..|.||.||.|||||||||||||||||
BPUM_0527___m    415 ATGATCATCGGTCCTACCTATTTAATTGAAAAAACAGGCGGGAAAAACGG    464

BSNT_01038___    495 TGACTTTAAAAGAGAACTATCCGAGTA--TAATTTGGAGGACCAAAAATG    542
                     |||.|||.|.||||   .|||.|| ||  |||                  
BPUM_0527___m    465 TGATTTTCACAGAG---CATCTGA-TATTTAA------------------    492

BSNT_01038___    543 A    543
                      
BPUM_0527___m    492 -    492


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