Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00041 and BPUM_0518

See Amino acid alignment / Visit BSNT_00041 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:58
# Commandline: needle
#    -asequence dna-align/BSNT_00041___recR.1.24716.seq
#    -bsequence dna-align/BPUM_0518___recR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00041___recR-BPUM_0518___recR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00041___recR-BPUM_0518___recR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00041___recR
# 2: BPUM_0518___recR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 597
# Identity:     480/597 (80.4%)
# Similarity:   480/597 (80.4%)
# Gaps:           0/597 ( 0.0%)
# Score: 1932.0
# 
#
#=======================================

BSNT_00041___      1 ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATT     50
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BPUM_0518___r      1 ATGCAATATCCTGAACCAATATCAAAGCTGATTGATAGCTTTATGAAATT     50

BSNT_00041___     51 GCCAGGGATCGGACCGAAAACAGCGGTTCGTCTGGCTTTTTTTGTTCTAG    100
                     ||||||.||||||||||||||.|||||.||||||||||||||||||||..
BPUM_0518___r     51 GCCAGGAATCGGACCGAAAACTGCGGTCCGTCTGGCTTTTTTTGTTCTTA    100

BSNT_00041___    101 GTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCG    150
                     |.|||.|.||||||||.||..|||||||.|||||.||..|.||.|||||.
BPUM_0518___r    101 GCATGCAGGAAGATGTCGTGCTAGATTTCGCGAAGGCGCTTGTTAATGCA    150

BSNT_00041___    151 AAACGCAACCTGACATATTGTTCAGTTTGCGGGCATATTACAGATCAGGA    200
                     ||.||.||..|.||.|||||.|||||.|||||.|||||.||||||||.||
BPUM_0518___r    151 AAGCGTAATTTAACTTATTGCTCAGTATGCGGCCATATCACAGATCAAGA    200

BSNT_00041___    201 CCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCTGTTATCTGTG    250
                     .|||||||||||.|||||||||||..|.||.|||.|.|||||||||||||
BPUM_0518___r    201 TCCTTGCTATATTTGTGAAGATACAAGAAGAGATCAATCTGTTATCTGTG    250

BSNT_00041___    251 TTGTGCAAGACCCTAAGGATGTTATCGCTATGGAGAAAATGAAGGAATAC    300
                     |.||.|||||.||.||.|||||.|||||.|||||.||.|||||.||||||
BPUM_0518___r    251 TAGTACAAGATCCAAAAGATGTGATCGCAATGGAAAAGATGAAAGAATAC    300

BSNT_00041___    301 AACGGACAGTATCACGTTCTTCACGGCGCTATTTCTCCAATGGACGGCAT    350
                     |||||....|||||.||.|||||.||.||||||||.||||||||.||.||
BPUM_0518___r    301 AACGGCTTATATCATGTCCTTCATGGTGCTATTTCGCCAATGGATGGTAT    350

BSNT_00041___    351 TGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG    400
                     |||.||.||||||||||||||.||.||..||.|||||.||||.||.||.|
BPUM_0518___r    351 TGGTCCAGAGGATATTAAAATTCCTGATCTGCTAAAAAGATTGCAAGACG    400

BSNT_00041___    401 ATCAAGTGACAGAAGTGATCCTCGCGACAAACCCTAATATAGAAGGGGAA    450
                     |||||||||||||.||.|||||.||.||.||.||.|||||.|||||.||.
BPUM_0518___r    401 ATCAAGTGACAGAGGTAATCCTTGCAACCAATCCCAATATTGAAGGAGAG    450

BSNT_00041___    451 GCAACGGCGATGTATATATCAAGGCTCCTCAAGCCGTCTGGTATTAAGCT    500
                     ||.||.||.||||||||.||.||..|..|.||.||.||.||.|||||.||
BPUM_0518___r    451 GCTACAGCCATGTATATCTCTAGATTGTTGAAACCATCAGGAATTAAACT    500

BSNT_00041___    501 CTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGACTTGGAATATGCTG    550
                     |||.||||||||.||||||||.||.||.||.||.|||||.||.|||||.|
BPUM_0518___r    501 CTCTCGTATTGCTCACGGACTACCAGTAGGTGGAGACTTAGAGTATGCAG    550

BSNT_00041___    551 ACGAGGTCACTCTTTCTAAAGCACTTGAAGGAAGACGCGAATTGTAA    597
                     |.||.|||||.||.||||||||.||.||.||.|||||.||..||||.
BPUM_0518___r    551 ATGAAGTCACACTGTCTAAAGCTCTAGAGGGCAGACGTGAGATGTAG    597


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