Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00031 and BPUM_0511
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:58
# Commandline: needle
# -asequence dna-align/BSNT_00031___dck.1.24716.seq
# -bsequence dna-align/BPUM_0511___dck.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00031___dck-BPUM_0511___dck.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00031___dck-BPUM_0511___dck.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00031___dck
# 2: BPUM_0511___dck
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 670
# Identity: 474/670 (70.7%)
# Similarity: 474/670 (70.7%)
# Gaps: 26/670 ( 3.9%)
# Score: 1553.5
#
#
#=======================================
BSNT_00031___ 1 ATGAAGGAACATC-ATATCCCTAACAATTCAATTATTACAGTAGCAGGAA 49
||||| .||.||| |.||.||.||..||.||.|.||.|||.|.||.||.|
BPUM_0511___d 1 ATGAA-CAATATCGAAATACCAAAAGATGCAGTGATCACAATTGCCGGGA 49
BSNT_00031___ 50 CAGTAGGTGTCGGAAAATCGACTTTAACAAAAACTTTAGCTAAACGGCTT 99
|.||.||||||||||||||.|||.|.||.|||||..||||..|...|||.
BPUM_0511___d 50 CTGTTGGTGTCGGAAAATCAACTATGACTAAAACGATAGCGGACAAGCTA 99
BSNT_00031___ 100 GGATTTAAAACATCGTTGGAGGAAGTCGATCATAATCCATACTTGGAAAA 149
||.|||.||||.||..|.||..||||.|||.||||.||||||||.||...
BPUM_0511___d 100 GGCTTTCAAACCTCTCTTGAAAAAGTAGATGATAACCCATACTTAGAGCC 149
BSNT_00031___ 150 GTTCTATCATGATTTTGAACGTTGGAGCTTTCACCTTCAAATTTACTTCT 199
.||.|||..|||||||.||.|.||||||||.||..|.|||.|.||.|||.
BPUM_0511___d 150 CTTTTATTCTGATTTTCAAAGATGGAGCTTCCATTTACAAGTCTATTTCC 199
BSNT_00031___ 200 TAGCTGAACGCTTCAAAGAACAGAAAAC-AATTTTTGAAGCCGGCGGAGG 248
|.||.||.||.||.||.||||| |||.| .|||||||||.|.||.|||||
BPUM_0511___d 200 TTGCGGAGCGTTTTAAGGAACA-AAAGCGGATTTTTGAATCTGGTGGAGG 248
BSNT_00031___ 249 TTTTGTACAGGATCGTTCGATTTATGAAGATACAGGAATTTTCGCAAAAA 298
.|.|||.||.||||||||.||||||||.||.||.||.||.||||||||||
BPUM_0511___d 249 ATATGTGCAAGATCGTTCAATTTATGAGGACACGGGCATATTCGCAAAAA 298
BSNT_00031___ 299 TGCATGCTGATAAAGGGACAATGTCAAAGGTTGATTATAAGACTTACACA 348
|||||||.||.|||||.||.|||||..|.||.||||||.|.||.||.|||
BPUM_0511___d 299 TGCATGCGGACAAAGGTACGATGTCTGAAGTAGATTATGAAACGTATACA 348
BSNT_00031___ 349 AGCCTTTTCGAAGCAATGGTAATGACACCGTATTTCCCACACCCAGATGT 398
||.||.|||||.||||||||.||||||||.||.|||||.|||||.|||||
BPUM_0511___d 349 AGTCTATTCGAGGCAATGGTGATGACACCTTACTTCCCTCACCCTGATGT 398
BSNT_00031___ 399 GTTGATCTATTTAGAAGGAGATCTGGAGAACATTTTAAACCGGATTGAAC 448
..|.|||||||||.|.||.|||.|..|..|.||||||.|.||.||.||..
BPUM_0511___d 399 TCTCATCTATTTACACGGGGATTTAAATCATATTTTACATCGTATCGAGG 448
BSNT_00031___ 449 AACGCGGCCGTGAGATGGAGCTTCAGACAAGCAGGTCTTATTGGGAAGAA 498
||||||||.|.||||||||...|||.||...|.|..|.||||||||||||
BPUM_0511___d 449 AACGCGGCAGAGAGATGGAAACTCAAACGGACCGAGCCTATTGGGAAGAA 498
BSNT_00031___ 499 ATGCATACACGCTAC-GAGAACTGGAT-----AAGCGGTTTTAATGCCTG 542
|||.|.||.||.||| .|||| ||||| ||...|.|||| ||
BPUM_0511___d 499 ATGTACACTCGATACACAGAA-TGGATCGAACAATTCGATTTA-----TG 542
BSNT_00031___ 543 CCCTGT-TTTAAAACTTCGCATTGAAGATTATGATCTT-CTGAACGACGA 590
.||.|| .|||||| ||..||||||||||||.|| ||| ||..|.||.||
BPUM_0511___d 543 TCCAGTGATTAAAA-TTAACATTGAAGATTACGA-CTTACTTCATGATGA 590
BSNT_00031___ 591 AAACTCGATTGAAAATATTGTAGATCAAATTGCTTCAGTTATTCATGATA 640
||.|||..||||....|||.|..||.||||.|||||.||.|||||..|.|
BPUM_0511___d 591 AAGCTCACTTGATCCCATTCTTCATGAAATAGCTTCTGTCATTCAAAAAA 640
BSNT_00031___ 641 ATC------AAAAAAAGTGA 654
||| |||.|||.|.|
BPUM_0511___d 641 ATCGCTCTAAAACAAAATAA 660
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