Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00025 and BPUM_0508
See
Amino acid alignment /
Visit
BSNT_00025 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:57
# Commandline: needle
# -asequence dna-align/BSNT_00025___yaaE.1.24716.seq
# -bsequence dna-align/BPUM_0508___yaaE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00025___yaaE-BPUM_0508___yaaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00025___yaaE-BPUM_0508___yaaE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00025___yaaE
# 2: BPUM_0508___yaaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 623
# Identity: 434/623 (69.7%)
# Similarity: 434/623 (69.7%)
# Gaps: 64/623 (10.3%)
# Score: 1448.0
#
#
#=======================================
BSNT_00025___ 1 ATGTTAACAATAGGTGTACTAGGACTTCAAGGAGCAGTTAGAGAGCACAT 50
|||.|||||||.|||||||||||.|||||||||||.||.||||||||.||
BPUM_0508___y 1 ATGCTAACAATTGGTGTACTAGGGCTTCAAGGAGCTGTGAGAGAGCATAT 50
BSNT_00025___ 51 CCATGCGATTGAAGCATGCGGCGCGGCTGGTCTTG----TCGTAAAACGT 96
.||..||||||||||.||.|||||.|..|| | ||.|.||||
BPUM_0508___y 51 TCAATCGATTGAAGCCTGTGGCGCAGAAGG----GAAGATCATCAAAC-- 94
BSNT_00025___ 97 CCGGAGCAGCTGAACGA-----AGTTGACGGGTTGATTTTGCCGGGCGGT 141
||||||..||.|.| .||||||||..|.|||.|.||.||.||.
BPUM_0508___y 95 ---GAGCAGAAGAGCTAGTATCTGTTGACGGTCTTATTATCCCTGGTGGA 141
BSNT_00025___ 142 GAGAGCACGACGATGCGCCGTTTGATCGATACGTATCAATTCATGGAGCC 191
||.||||||||||||.|..|..|.||.|||||||||||||||||.||.||
BPUM_0508___y 142 GAAAGCACGACGATGAGAAGACTCATGGATACGTATCAATTCATTGAACC 191
BSNT_00025___ 192 GCTTCGTGAA----TTCGCTGCTCAGGGCAAACCGATGTTTGGAACATGT 237
| .|.|| ||||||||..|.||.||||||||.||.||.||.|||
BPUM_0508___y 192 G----ATCAAAGCGTTCGCTGCAAAAGGGAAACCGATTTTCGGGACTTGT 237
BSNT_00025___ 238 GCCGGATTAATTATATTAGCAAA------AGAAATTGCCGGTTC-AGATA 280
|||||.||.|||||..|.||||| |||| |.|| |||||
BPUM_0508___y 238 GCCGGTTTGATTATGCTGGCAAAGCATATAGAA-------GATCGAGATA 280
BSNT_00025___ 281 ATCCTCATTTAGGTCTTCTGAATGTGGTTGTAGAACGTAATTCATTTGGC 330
||.|||||.|.||.||..|.|||||...|||.|.|||.||||||||||||
BPUM_0508___y 281 ATGCTCATCTTGGACTGTTAAATGTATCTGTTGCACGGAATTCATTTGGC 330
BSNT_00025___ 331 CGGCAGGTTGACAGCTTTGAAGCTGATTTAACAATTAAAGGCTTGGACGA 380
.|.|||||.||||||||||||||.||||||..|.|.|||||..||||.|.
BPUM_0508___y 331 AGACAGGTAGACAGCTTTGAAGCAGATTTAGAAGTAAAAGGACTGGATGC 380
BSNT_00025___ 381 GCCTTTTACTGGGGTATTCATCCGTGCTCCGCATAT-TTTAGAAGCTGGT 429
.||.|||||.||.||.|||||||||||.||.||||| .|.|| .||.|.|
BPUM_0508___y 381 CCCGTTTACAGGAGTGTTCATCCGTGCGCCTCATATCATCAG-TGCAGAT 429
BSNT_00025___ 430 GAAAATGTTGAAGTTCTATCGGAGCATAATGGTCGTATTGTAGCCGCGAA 479
||.|..||.||.||..|..|.||..||.|||||.|.|||||....|||||
BPUM_0508___y 430 GAGAGCGTAGAGGTCATGGCTGAATATGATGGTAGGATTGTGATGGCGAA 479
BSNT_00025___ 480 ACAGGGG----CAAT-TCCTTGGCTGCTCATTCCATCCGGAGCTGACAGA 524
| | |||| ||.|.|||||.||.||.|||||.|||||||||||
BPUM_0508___y 480 A-----GAAAACAATATCTTAGGCTGTTCTTTTCATCCAGAGCTGACAGA 524
BSNT_00025___ 525 AGATCACCGAGTGACGCAGCTGTTTGTTGAAATGGTTGAGGA-ATATAAG 573
.||.||||||.|.||.||.|||||||||||||||| |||.|| .|||||
BPUM_0508___y 525 CGACCACCGATTAACACAACTGTTTGTTGAAATGG-TGAAGACCTATAA- 572
BSNT_00025___ 574 CAA--AAGGCACT---TGTATAA 591
|| ||| || |||||||
BPUM_0508___y 573 -AACGAAG---CTCGCTGTATAA 591
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.