Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00024 and BPUM_0507
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:57
# Commandline: needle
# -asequence dna-align/BSNT_00024___yaaD.1.24716.seq
# -bsequence dna-align/BPUM_0507___yaaD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00024___yaaD-BPUM_0507___yaaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00024___yaaD-BPUM_0507___yaaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00024___yaaD
# 2: BPUM_0507___yaaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 889
# Identity: 729/889 (82.0%)
# Similarity: 729/889 (82.0%)
# Gaps: 8/889 ( 0.9%)
# Score: 2985.5
#
#
#=======================================
BSNT_00024___ 1 ATG-GCTCAAACA--GGTACTGAACGTGTAAAACGCGGAATGGCAGAAAT 47
.|| || ||.| ||.||||||||.||.|||||.||||||||||||||
BPUM_0507___y 1 GTGAGC---AATAAGGGAACTGAACGAGTGAAACGTGGAATGGCAGAAAT 47
BSNT_00024___ 48 GCAAAAAGGCGGCGTCATCATGGACGTCATCAATGCGGAACAAGCGAAAA 97
||||||.||.||||||||.|||||.|||.||||.||.|||||.||.||.|
BPUM_0507___y 48 GCAAAAGGGTGGCGTCATTATGGATGTCGTCAACGCTGAACAGGCAAAGA 97
BSNT_00024___ 98 TCGCTGAAGAAGCTGGAGCTGTCGCTGTAATGGCGCTAGAACGTGTGCCG 147
||||.||||||||.||.||.||.||.||.|||||.||||||||.||.||.
BPUM_0507___y 98 TCGCAGAAGAAGCAGGTGCGGTGGCAGTTATGGCACTAGAACGAGTTCCA 147
BSNT_00024___ 148 GCAGATATTCGCGCGGCTGGAGGAGTTGCCCGTATGGCTGACCCTACAAT 197
||.||||||||.||.||.||.||.||||||||||||||.|||||.|.|||
BPUM_0507___y 148 GCTGATATTCGTGCAGCCGGCGGTGTTGCCCGTATGGCAGACCCAAGAAT 197
BSNT_00024___ 198 CGTGGAAGAAGTAATGAATGCAGTATCTATCCCTGTAATGGCAAAAGCGC 247
|||.|||||||||...|||||||||.|.||.||.||.|||||||||||.|
BPUM_0507___y 198 CGTAGAAGAAGTACAAAATGCAGTAACGATTCCAGTCATGGCAAAAGCAC 247
BSNT_00024___ 248 GTATCGGACATGTTGTTGAAGCGCGTGTGCTTGAAGCTATGGGTGTTGAC 297
|||||||.|||.|.||.||.||.|||||.||||||||..|.||||||||.
BPUM_0507___y 248 GTATCGGCCATATCGTCGAGGCTCGTGTCCTTGAAGCACTTGGTGTTGAT 297
BSNT_00024___ 298 TATATTGATGAAAGTGAAGTTCTGACGCCGGCTGATGAAGAATTTCATTT 347
|||||.|||||.||||||||.||||||||.||.|||||.|||||.|||||
BPUM_0507___y 298 TATATCGATGAGAGTGAAGTGCTGACGCCCGCAGATGAGGAATTCCATTT 347
BSNT_00024___ 348 AAATAAAAATGAATACACAGTTCCTTTTGTTTGTGGCTGCCGTGATCTTG 397
|||||||||||||||||||||.||||||||.|||||.|||||||||.|.|
BPUM_0507___y 348 AAATAAAAATGAATACACAGTACCTTTTGTCTGTGGTTGCCGTGATTTAG 397
BSNT_00024___ 398 GTGAAGCAACACGCCGTATTGCGGAAGGTGCTTCTATGCTTCGCACAAAA 447
||||||||||.||.||||||||.|||||.||||||||||||||.||||||
BPUM_0507___y 398 GTGAAGCAACCCGTCGTATTGCAGAAGGAGCTTCTATGCTTCGTACAAAA 447
BSNT_00024___ 448 GGTGAGCCTGGAACAGGTAATATTGTTGAGGCTGTTCGCCATATGCGTAA 497
||.||||||||||||||.||.|||||.||.|||||.||.||||||.|.||
BPUM_0507___y 448 GGAGAGCCTGGAACAGGCAACATTGTAGAAGCTGTCCGTCATATGAGAAA 497
BSNT_00024___ 498 AGTTAACGCTCAAGTGCGCAAAGTAGTTGCGATGAGTGAGGATGAGCTAA 547
.||.||.|||||..|.||.|||||.|..||.||||||||.|||||.||.|
BPUM_0507___y 498 GGTCAATGCTCAGATTCGTAAAGTGGCAGCAATGAGTGAAGATGAACTGA 547
BSNT_00024___ 548 TGACAGAAGCGAAAAACCTAGGTGCTCCTTACGAGCTTCTT-CTTCAAAT 596
|||||||||||||.||||||||.||.||.||.|| .||.|| ||||||||
BPUM_0507___y 548 TGACAGAAGCGAAGAACCTAGGAGCACCGTATGA-ATTATTGCTTCAAAT 596
BSNT_00024___ 597 TAAAAAAGACGGCAAGCTTCCTGTCGTTAACTTTGCCGCTGGCGGCGTAG 646
.||||||||||||||.||.||.||.||.||||||||.||.||.|||||.|
BPUM_0507___y 597 CAAAAAAGACGGCAAACTCCCAGTTGTGAACTTTGCAGCGGGAGGCGTTG 646
BSNT_00024___ 647 CAACTCCAGCTGATGCTGCTCTCATGATGCAGCTTGGTGCTGACGGAGTA 696
|.||.|||||.||||||||..|.||||||||||||||.||.|||||.|||
BPUM_0507___y 647 CGACACCAGCAGATGCTGCGTTAATGATGCAGCTTGGAGCAGACGGTGTA 696
BSNT_00024___ 697 TTTGTTGGTTCTGGTATTTTTAAATCAGACAACCCTGCTAAATTTGCGAA 746
||||||||.||||||||.||||||||||||||.||.||.||||||||.||
BPUM_0507___y 697 TTTGTTGGATCTGGTATCTTTAAATCAGACAATCCAGCGAAATTTGCAAA 746
BSNT_00024___ 747 AGCAATTGTGGAAGCAACAACTCACTTTACTGATTACAAATTAATCGCTG 796
|||||||||.||||||||.||||||||.||.||||||....|.||.||.|
BPUM_0507___y 747 AGCAATTGTTGAAGCAACGACTCACTTCACAGATTACGGTCTCATTGCAG 796
BSNT_00024___ 797 AGTTGTCAAAAGAGCTTGGTACTGCAATGAAAGGGATTGAAATCTCAAAC 846
||.|.||||||||||||||.||.||.||||||||.||||||||||||||.
BPUM_0507___y 797 AGCTATCAAAAGAGCTTGGAACAGCCATGAAAGGAATTGAAATCTCAAAT 846
BSNT_00024___ 847 TTACTTCCAGAACAGCGTATGCAAGAACGCGGCTGGTAA 885
.||||.||||||.|||||||||||||.||.|||||||||
BPUM_0507___y 847 CTACTGCCAGAAGAGCGTATGCAAGAGCGTGGCTGGTAA 885
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