Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00022 and BPUM_0504
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:57
# Commandline: needle
# -asequence dna-align/BSNT_00022___guaB.1.24716.seq
# -bsequence dna-align/BPUM_0504___guaB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00022___guaB-BPUM_0504___guaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00022___guaB-BPUM_0504___guaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00022___guaB
# 2: BPUM_0504___guaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1476
# Identity: 1186/1476 (80.4%)
# Similarity: 1186/1476 (80.4%)
# Gaps: 18/1476 ( 1.2%)
# Score: 4757.0
#
#
#=======================================
BSNT_00022___ 1 ATGTGGGAAAGTAAATTTTCAAAAGAAGGCTTAACGTTCGACGATGTGCT 50
|||||||||||||||||||||||||||||.||.|||||.||||||||..|
BPUM_0504___g 1 ATGTGGGAAAGTAAATTTTCAAAAGAAGGTTTGACGTTTGACGATGTTTT 50
BSNT_00022___ 51 GCTTGTGCCAGCAAAGTCTGAGGTACTTCCGCATGATGTGGATTTATCTG 100
||||||.|||||.||||||||.||||||||||.||||||.||||||||.|
BPUM_0504___g 51 GCTTGTTCCAGCTAAGTCTGAAGTACTTCCGCGTGATGTCGATTTATCAG 100
BSNT_00022___ 101 TAGAACTTACAAAAACGTTAAAGCTAAATATTCCTGTCATCAGCGCAGGT 150
|.|||.|.||||..||.|||||.|||||.|||||.||.|||||.|||||.
BPUM_0504___g 101 TTGAATTAACAAGCACATTAAAACTAAACATTCCAGTGATCAGTGCAGGA 150
BSNT_00022___ 151 ATGGACACTGTAACAGAATCAGCAATGGCAATTGCAATGGCAAGACAGGG 200
||||||||.||.|||||.|||..||||||.||||||||||||.|.||.||
BPUM_0504___g 151 ATGGACACGGTGACAGAGTCACAAATGGCGATTGCAATGGCACGTCAAGG 200
BSNT_00022___ 201 CGG-CTTGGGCATCATTCACAAAAATATGTCCATTGAACAGCAGGCTGAA 249
.|| ||| ||.||||||||.||.||.|||||.|||||.||.||.||.||.
BPUM_0504___g 201 TGGTCTT-GGTATCATTCATAAGAACATGTCTATTGAGCAACAAGCAGAG 249
BSNT_00022___ 250 CAAGTTGATAAAGTAAAGCGTTCTGAGCGCGGCGTTATCACAAATCCCTT 299
|||||.|||||||||||.|||||.||||||||||||||.||||||||.||
BPUM_0504___g 250 CAAGTGGATAAAGTAAAACGTTCAGAGCGCGGCGTTATTACAAATCCATT 299
BSNT_00022___ 300 CTTTTTAACTCCTGATCACCAAGTATTTGATGCGGAGCATTTGATGGGGA 349
|||.|||||.|||||.||.||||||||||||||.|||||..|.|||||.|
BPUM_0504___g 300 CTTCTTAACACCTGAGCATCAAGTATTTGATGCAGAGCACCTAATGGGTA 349
BSNT_00022___ 350 AATACAGAATTTCCGGTGTTCCGATTGTAAATAACGAAGAAGACCAGAAG 399
|||||.|.|||||.|||||.|||||||||||||||..||||||.||.|||
BPUM_0504___g 350 AATACCGTATTTCAGGTGTACCGATTGTAAATAACATAGAAGATCAAAAG 399
BSNT_00022___ 400 CTTGTTGGAATTATTACAAACCGTGACCTTCGTTTTATTTCTGACTACTC 449
||||||||.||||||||.|||||||||||||||||||||||.||.||.||
BPUM_0504___g 400 CTTGTTGGTATTATTACGAACCGTGACCTTCGTTTTATTTCGGATTATTC 449
BSNT_00022___ 450 AATGAAAATCAGCGACGTCATGACGAAAGAAGAGCTAGTTACTGCATCTG 499
||||||.||||||||.||.|||||.|||||.||.||.||.||.||.||.|
BPUM_0504___g 450 AATGAAGATCAGCGATGTGATGACAAAAGAGGAACTCGTGACAGCTTCGG 499
BSNT_00022___ 500 TAGGAACTACTCTGGATGAAGCTGAAAAGATTTTGCAAAAACATAAAATT 549
|.||.||.||..|.||.|||||||||||.|||.|.||..||.||||||||
BPUM_0504___g 500 TGGGTACAACGTTAGAAGAAGCTGAAAAAATTCTACAGCAATATAAAATT 549
BSNT_00022___ 550 GAAAAGCTTCCTCTCGTAGATGACCAGAATAAA--TTAAAAGGTCTTATC 597
|||||..|.|||||..|||||||| |||..|| |||||||||||.|||
BPUM_0504___g 550 GAAAAATTACCTCTTTTAGATGAC--GAAGGAACGTTAAAAGGTCTCATC 597
BSNT_00022___ 598 ACAATTAAAGACATTGAAAAAGTCATTGAGTTCCCGAACTCATCTAAAGA 647
||.||.|||||.|||||||||||.||.||.|||||.|||||.||||||||
BPUM_0504___g 598 ACCATCAAAGATATTGAAAAAGTGATCGAATTCCCTAACTCCTCTAAAGA 647
BSNT_00022___ 648 --CATTCACGGCCGCCTGATCGTTGGCGCGGCAGTTGGTGTAACTGGCGA 695
|| ||.|||||..|.||.|||||.||.||.||||||||.||||||||
BPUM_0504___g 648 TGCA--CATGGCCGTTTAATTGTTGGTGCTGCTGTTGGTGTCACTGGCGA 695
BSNT_00022___ 696 TACAATGACTCGCGTCAAAAAGCTTGTTGAAGCCAATGTTGATGTGATTG 745
||||||||||||.||.|.|||..|.||.|||||||||||.|||||..|||
BPUM_0504___g 696 TACAATGACTCGTGTGAGAAAATTAGTCGAAGCCAATGTGGATGTCGTTG 745
BSNT_00022___ 746 TTATCGATACAGCTCACGGACACTCTCAAGGCGTTTTAAACACAGTTACA 795
|.||.|||||.||.||.||.||.||.|||||.|||.|||||||.||..|.
BPUM_0504___g 746 TCATTGATACGGCACATGGTCATTCACAAGGTGTTCTAAACACTGTATCG 795
BSNT_00022___ 796 AAAATCCGTGAAACGTATCCCGAAT----TAAACATTATTGCTGGAAACG 841
|||||||||||||||||||| | |.||.||.|||||||||||.|
BPUM_0504___g 796 AAAATCCGTGAAACGTATCC----TTCTCTTAATATCATTGCTGGAAATG 841
BSNT_00022___ 842 TGGCAACAGCTGAAGCGACAAGAGCGCTTATCGAAGCTGGAGCAGACGTT 891
|.||||||||||||||.||.|.|||..|..|.|||||.||||||||..||
BPUM_0504___g 842 TTGCAACAGCTGAAGCAACTAAAGCATTGTTTGAAGCAGGAGCAGATATT 891
BSNT_00022___ 892 GTCAAAGTTGGAATAGGGCCTGGTTCAATTTGTACTACACGTGTTGTAGC 941
||.||||||||.||.||.||.||.||.||.|||||.||||||||||||||
BPUM_0504___g 892 GTGAAAGTTGGTATCGGACCAGGATCTATCTGTACAACACGTGTTGTAGC 941
BSNT_00022___ 942 CGGGGTGGGTGTTCCGCAAATTACAGCAATTTATGATTGTGCGACTGAAG 991
.||.||.|||||.||.|||||.|||||.||.|||||.|||||.||.||||
BPUM_0504___g 942 AGGTGTTGGTGTACCACAAATCACAGCGATCTATGACTGTGCAACAGAAG 991
BSNT_00022___ 992 CAAGAAAACACGGCAAAACAATCATCGCCGACGGTGGGATTAAATTCTCT 1041
||||||||||.||.|||.|.||.||.||.||.|||||.|||||||..||.
BPUM_0504___g 992 CAAGAAAACATGGTAAAGCTATTATTGCAGATGGTGGAATTAAATATTCA 1041
BSNT_00022___ 1042 GGCGATATCACTAAAGCATTGGCAGCCGGCGGACATGCTGTTATGCTCGG 1091
||.||||||...|||||..|.|||.|.||.|||||||||||||||||.||
BPUM_0504___g 1042 GGTGATATCGTAAAAGCTCTAGCATCTGGTGGACATGCTGTTATGCTTGG 1091
BSNT_00022___ 1092 AAGCTTGCTTGCAGGCACATCAGAAAGCCCTGGTGAAACTGAAATCTACC 1141
||||.|.||.||.||.|||||.||||||||.||.||.||.|||||.|.||
BPUM_0504___g 1092 AAGCCTTCTAGCTGGTACATCTGAAAGCCCAGGAGACACAGAAATTTTCC 1141
BSNT_00022___ 1142 AAGGCAGAAGATTTAAGGTATACCGCGGCATGGGATCAGTTGCTGCAATG 1191
||||.|||.|.||.||.||.||.|||||.|||||.|||||.|||||||||
BPUM_0504___g 1142 AAGGTAGACGCTTCAAAGTTTATCGCGGTATGGGTTCAGTGGCTGCAATG 1191
BSNT_00022___ 1192 GAAAAAGGAAGTAAAGACCGTTACTTCCAAGAAGAAAACAAAAAATTTGT 1241
|||||||||||||||||.|||||||||||||||||.||.||||||||.||
BPUM_0504___g 1192 GAAAAAGGAAGTAAAGATCGTTACTTCCAAGAAGATAATAAAAAATTCGT 1241
BSNT_00022___ 1242 TCCTGAAGGAATTGAAGGACGCACACCTTACAAAGGGCCAGTTGAAGAAA 1291
|||.|||||.||||||||.||.|||||.||||||||.|||||.|..||.|
BPUM_0504___g 1242 TCCAGAAGGTATTGAAGGCCGTACACCATACAAAGGACCAGTCGTTGATA 1291
BSNT_00022___ 1292 CCGTTTATCAGCTAGTCGGAGGCCTTCGTTCTGGTATGGGGTATTGCGGG 1341
|.||.|||||.|||||.||.||..|.|||||.||||||||.|||||.||.
BPUM_0504___g 1292 CAGTGTATCAACTAGTTGGCGGTATCCGTTCAGGTATGGGCTATTGTGGA 1341
BSNT_00022___ 1342 TCCAAAGATCTGCGTGCGCTAAGAGAAGAAGCTCAGTTCATTCGCATGAC 1391
.|..|||||.|.||..|.||.|||||||||||.|||||||||||.|||||
BPUM_0504___g 1342 ACACAAGATTTACGCTCTCTTAGAGAAGAAGCACAGTTCATTCGAATGAC 1391
BSNT_00022___ 1392 TGGCGCAGGACTTCGCGAAAGCCATCCGCATGACGTACAGATTACAAAAG 1441
|||.|||||||||||.||.||.|||||.|||||.|||||.||||||||||
BPUM_0504___g 1392 TGGTGCAGGACTTCGTGAGAGTCATCCACATGATGTACAAATTACAAAAG 1441
BSNT_00022___ 1442 AATCACCTAACTATACAATTTCATAA 1467
|||||||.|||||.||||||||.|.|
BPUM_0504___g 1442 AATCACCAAACTACACAATTTCTTGA 1467
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