Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01346 and BPUM_0452
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_01346___acoB.1.24716.seq
# -bsequence dna-align/BPUM_0452___acoB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01346___acoB-BPUM_0452___acoB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01346___acoB-BPUM_0452___acoB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01346___acoB
# 2: BPUM_0452___acoB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1051
# Identity: 752/1051 (71.6%)
# Similarity: 752/1051 (71.6%)
# Gaps: 35/1051 ( 3.3%)
# Score: 2572.5
#
#
#=======================================
BSNT_01346___ 1 ATGGCGAGAGTCATAAGCATGTC-AGACGCGATCAATGAAGCAATGAAGC 49
|||||.||.|..||.|||||||| || .||..|.||||||||.||.||.|
BPUM_0452___a 1 ATGGCAAGGGAAATTAGCATGTCTAG-TGCTTTGAATGAAGCGATTAAAC 49
BSNT_01346___ 50 TTGCGATGAGAAGAGATGAAAATGTGCTTTTGATCGGTGAGGATGTCGCC 99
|.||.|||||||||||.||||||||..||||.||.||.||.|||||.||.
BPUM_0452___a 50 TGGCAATGAGAAGAGACGAAAATGTCATTTTAATGGGGGAAGATGTTGCG 99
BSNT_01346___ 100 GGGGGAGCGGCTGTCGATCATTTGCAGGATGATGAAGCATGGGGCGGTGT 149
||.||.||...|||.|||||.||.||.|||||||||||||||||||||||
BPUM_0452___a 100 GGAGGCGCTCATGTAGATCACTTACAAGATGATGAAGCATGGGGCGGTGT 149
BSNT_01346___ 150 ATTAGGGGTCACAAAGGGGCTCGTACAGGAATTCGGGCGTACAAGAGTG- 198
..|.||.||.||.||.||..||||.||||||||.||.||| .||.|||
BPUM_0452___a 150 TCTTGGTGTAACGAAAGGAATCGTCCAGGAATTTGGACGT--GAGCGTGT 197
BSNT_01346___ 199 -CTGGACACACCGATTTCTGAGGCGGGCTATATGGGTGCGGCTATGGCTG 247
||.||.|||||.|||..|||.||.||||||.|.||.||.||.|||||.|
BPUM_0452___a 198 CCTTGATACACCAATTAGTGAAGCTGGCTATGTAGGCGCAGCCATGGCAG 247
BSNT_01346___ 248 CGGCATCAACCGGTTTGAGACCGATTGCCGAGCTGATGTTTAACGATTTT 297
|.||.|||||.||..|.|||||.|||||.||.||.||||||||.||||||
BPUM_0452___a 248 CTGCTTCAACAGGGCTAAGACCAATTGCGGAACTTATGTTTAATGATTTT 297
BSNT_01346___ 298 ATCGGCACGTGCTTTGACCAGGTGATCAACCAAGGGGCGAAATTCCGTTA 347
|||||.||.||..|.|||||.|||.|.||.||||||||.|||||.||.||
BPUM_0452___a 298 ATCGGTACTTGTCTCGACCAAGTGCTGAATCAAGGGGCAAAATTTCGGTA 347
BSNT_01346___ 348 CATGTTTGGCGGAAAAGCGCAAGTGCCGATTACCGTCCGCACCACATACG 397
||||||||||||||||||..|.|||||.||.||..|..|.||.|||.|.|
BPUM_0452___a 348 CATGTTTGGCGGAAAAGCAGAGGTGCCAATCACAATTAGAACGACACATG 397
BSNT_01346___ 398 GAGCAGGGTTCCGGGCCGCTGCCCAGCATTCACAAGCGCTGTATGGCCTT 447
|.||.||.||..|.||.||.||.|||||.||.|||....||||||..||.
BPUM_0452___a 398 GGGCGGGTTTTAGAGCAGCAGCTCAGCACTCGCAAAGTTTGTATGCGCTA 447
BSNT_01346___ 448 TTCACGAGCATCCCTGGACTGAAGACAGTTGTTCCATCCAATCCGTATGA 497
||.||.||||||||.|||.||||...||||||.||.||....||.|||||
BPUM_0452___a 448 TTTACAAGCATCCCAGGATTGAAAGTAGTTGTACCTTCTTCCCCTTATGA 497
BSNT_01346___ 498 TGCCAAAGGTCTTCTGCTTGCAGCAATAGAAGATAATGATCCGGTGTTCT 547
|||||||||.||.|||||.|||||.||.||.|||.|.||.||.||..|||
BPUM_0452___a 498 TGCCAAAGGGCTGCTGCTGGCAGCGATTGAGGATCAGGACCCTGTCATCT 547
BSNT_01346___ 548 TCTTTGAAGACAAAACGTCCTACAACATGAAGGGCGAGGTGCCGGAAGAT 597
|.|||||||||||.|||...|||||.||.|..||.||.|||||||||...
BPUM_0452___a 548 TTTTTGAAGACAAGACGCTTTACAATATCACAGGAGATGTGCCGGAAAGG 597
BSNT_01346___ 598 TATTATACAATTCCCCTTGGAAAAGCGGATATCAAACGCGAGGGCAATGA 647
|||||.|||.|.||.|||||.|||||.|||.|.||..|.|||||...|||
BPUM_0452___a 598 TATTACACACTGCCGCTTGGGAAAGCAGATGTGAAGAGAGAGGGATCTGA 647
BSNT_01346___ 648 TGTTACGCTCTTTGCAGTCGGCAAGCAGGTCAATACTGCGCTTGAAGCGG 697
|||.||..||||||||||.|||||.||.||..||||.||.||.|||||||
BPUM_0452___a 648 TGTAACCATCTTTGCAGTAGGCAAACAAGTGCATACAGCACTCGAAGCGG 697
BSNT_01346___ 698 CTGCAC----AGCTTTCAGAGAGGGGCATCGAAGCCGAGGTCCTTGATCC 743
|.|..| ||||..|..| ||.||.|||||.||.||..|||||||
BPUM_0452___a 698 CAGAGCAATTAGCTGCCCAA----GGTATTGAAGCGGAAGTGATTGATCC 743
BSNT_01346___ 744 GCGCAGTCTGTCCCCTCTGGATGAGGATGCGATTTTCACATCGTTAGAAA 793
..|.||..||||.||.||.|||||.||.||.|||.|.||.||..||||||
BPUM_0452___a 744 AAGAAGCTTGTCGCCGCTTGATGAAGAGGCCATTCTGACTTCAGTAGAAA 793
BSNT_01346___ 794 AAACAAATCGTCTGATCATCATTGATGAAGCCAATCCGCGATGCAGCATT 843
||||||||||.||..||||..|.||||||||.|||||..|.|||.|.|||
BPUM_0452___a 794 AAACAAATCGACTTGTCATTGTCGATGAAGCAAATCCAAGGTGCGGAATT 843
BSNT_01346___ 844 GCCACGGATATTGCTGCGCTTGTCGCTGACAAGGGCTTTGATTTGCTTGA 893
|||.|.|||||..||.|..|.||.||.||.||.||.||||||||.|||||
BPUM_0452___a 844 GCCGCAGATATCTCTTCTTTGGTTGCGGATAAAGGATTTGATTTACTTGA 893
BSNT_01346___ 894 TGCGCCGATTAAACGGATTACAGCGCCGCATACACCGGTTCCGTTTTCAC 943
.|||||.||.|||....|.||.||.||.|||||.|||||.||.|||||||
BPUM_0452___a 894 CGCGCCAATCAAAAAAGTGACGGCTCCTCATACGCCGGTACCATTTTCAC 943
BSNT_01346___ 944 CAGTGCTTGAAGATCAATATTTGCCGACACCAGATAAAATTGTCAGCGTC 993
||...|||||||||..||||.||||.|||||.||||||.||||.|
BPUM_0452___a 944 CACCTCTTGAAGATATATATCTGCCAACACCTGATAAAGTTGTGA----- 988
BSNT_01346___ 994 ACGCTTGAAT------TGCTTGGC--GAGCC--GGCAA-----TGAATTA 1028
||.| ||.|| ||.||||| |||.| |.||| ||||.||
BPUM_0452___a 989 ACAC-TGTATTAGAGATGATTGGCAAGAGTCATGACAAGATCTTGAACTA 1037
BSNT_01346___ 1029 A 1029
.
BPUM_0452___a 1038 G 1038
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