Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01344 and BPUM_0451
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_01344___acoA.1.24716.seq
# -bsequence dna-align/BPUM_0451___acoA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01344___acoA-BPUM_0451___acoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01344___acoA-BPUM_0451___acoA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01344___acoA
# 2: BPUM_0451___acoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1026
# Identity: 716/1026 (69.8%)
# Similarity: 716/1026 (69.8%)
# Gaps: 72/1026 ( 7.0%)
# Score: 2427.0
#
#
#=======================================
BSNT_01344___ 1 AT-GAAATTGTTAAAACGAGAAGGCTTGTCATTAACTGAGGAAAAAGCGC 49
|| |||| ||.||.|.||..|.||||||||..
BPUM_0451___a 1 ATGGAAA-------------------TGGCACTCACAAAAGAAAAAGCCG 31
BSNT_01344___ 50 TGTGGATGTACCAAAAGATGCTGGAGAT----CAGGGGCTTTGAAGACAA 95
|.||||||||.|||||.||||.|||.|| || .||||||||..|
BPUM_0451___a 32 TTTGGATGTATCAAAAAATGCAGGAAATTCGCCA----ATTTGAAGATCA 77
BSNT_01344___ 96 AGTGCATGAACTGTTCGCCC---AGGGAGTGCTT-CCCGGATTCGTTCAT 141
|||.|| .|||.||....| ||||| .||| ||.|||||.||.|||
BPUM_0451___a 78 AGTACA--CACTCTTTTTACAAAAGGGA--TCTTGCCAGGATTTGTCCAT 123
BSNT_01344___ 142 TTATATGCCGGTGAGGAAGCCGTGGCTGTAGGGGTGTGCGCTCATTTACA 191
.|.|||||.|||||.|||||.||.||||||||.||.|||||||||.|..|
BPUM_0451___a 124 CTTTATGCTGGTGAAGAAGCTGTTGCTGTAGGTGTCTGCGCTCATCTGAA 173
BSNT_01344___ 192 TGATGGCGACAGCATTACAAGCACCCACAGGGGACATGGACATTGTATCG 241
|||....|||||.||||||||.||.||..|.||.||.||.||||||||||
BPUM_0451___a 174 TGAACAAGACAGTATTACAAGTACACATCGCGGCCACGGTCATTGTATCG 223
BSNT_01344___ 242 CCAAAGGCTGTGATTTGGACGGCATGATGGCGGAAATTTTCGGGAAAGCG 291
|.||.|||||||||.|..|.||.||||||||.|||||.|..||.|||||.
BPUM_0451___a 224 CGAAGGGCTGTGATCTAAAAGGAATGATGGCAGAAATCTATGGAAAAGCC 273
BSNT_01344___ 292 ACCGGATTGTGCAAAGGCAAGGGCGGTTCTATGCACATTGCGGATCTTGA 341
||.||..|.||.|||||.||.||.||.||||||||||||||.|||.||||
BPUM_0451___a 274 ACAGGTCTTTGTAAAGGAAAAGGTGGATCTATGCACATTGCAGATTTTGA 323
BSNT_01344___ 342 TAAAGGCATGTTAGGCGCAAATGGAATCGTCGGGGGCGGCTTTACGCTCG 391
||||||.|||.||||.||.||.|||||.||.||.||.||||||.|.||.|
BPUM_0451___a 324 TAAAGGAATGCTAGGTGCCAACGGAATTGTTGGAGGTGGCTTTCCACTTG 373
BSNT_01344___ 392 CATGCGGATCAGCGCTCACGGCTAAATATAAACAGACTAAAAATGTAAGC 441
|.|||||..||||.||.|||||||||||||||.||||.||.|||||||||
BPUM_0451___a 374 CGTGCGGGGCAGCCCTTACGGCTAAATATAAAAAGACAAATAATGTAAGC 423
BSNT_01344___ 442 GTTTGCTTTTTCGGGGACGGGGCAAATAACCAAGGCACCTTCCACGAAGG 491
|||||||||||.||||||||.||.||.||.|||||.||.||.||||||||
BPUM_0451___a 424 GTTTGCTTTTTTGGGGACGGTGCTAACAATCAAGGGACTTTTCACGAAGG 473
BSNT_01344___ 492 GCTGAATTTAGCGGCTGTATGGAACCTTCCTGTCGTGTTTGTTGCTGAAA 541
..|.|||.|.|||||..|.|||||.||.||.|||.|.||..|.||.||||
BPUM_0451___a 474 AATCAATCTCGCGGCCATCTGGAAACTGCCAGTCATTTTCATCGCAGAAA 523
BSNT_01344___ 542 ACAACGGCTATGGCGAAGCTACCCCATTTGAGTACGCATCAGCCTGTGAT 591
||||.||.||.||.|||||.||.||||||...||.||.|||..|||..|.
BPUM_0451___a 524 ACAATGGGTACGGGGAAGCGACGCCATTTTCTTATGCTTCAAGCTGCAAA 573
BSNT_01344___ 592 TCAATCGCCGATCGGGCAGCTGCTTATAACATGCCGGGGGTTACAGTTGA 641
|||||||..|||||.||.||.|.||||.||||.||.|||.||..|||.||
BPUM_0451___a 574 TCAATCGTAGATCGAGCGGCCGGTTATGACATTCCTGGGATTCAAGTAGA 623
BSNT_01344___ 642 CGGCAAAGATATTTTAGCAGTTTACCAGGCAGCCGAGGAAGCGATAGAAA 691
.||.||||||.|..|.||.|||||.||.||.||.||..|||||||||||.
BPUM_0451___a 624 TGGAAAAGATGTGATGGCTGTTTATCAAGCCGCAGAACAAGCGATAGAAC 673
BSNT_01344___ 692 GAGCAAGAAACGGCGGCGGCCCGTCTTTGATTGAATGTATGACCTACAGA 741
||||||.|||.||.|..||.|||.|.|||||||||||.|||||.||..|.
BPUM_0451___a 674 GAGCAAAAAATGGGGAAGGTCCGACATTGATTGAATGCATGACATATCGG 723
BSNT_01344___ 742 AACTACGGCCATTTCGAAGGAGATGCCCAAACCTATAAAACGAAGGATGA 791
||.||.||.|||||.||||||||.||.||...|||.|||||.||..|.||
BPUM_0451___a 724 AATTATGGTCATTTTGAAGGAGACGCTCAGCGCTACAAAACCAATCAAGA 773
BSNT_01344___ 792 AAGAGTTGAGCACCTTGAAGAAAAAGATGCCAT---TCAAGGTTTTAAAA 838
||.|...||.||.|..|||||.|.||||||.|| || .||||||||
BPUM_0451___a 774 AAAAACCGAACATCAAGAAGAGAGAGATGCGATCGCTC---TTTTTAAAA 820
BSNT_01344___ 839 ACTACCTTTTAA--AAGAAACAGATGCT----AAT---AAGCTGTCAGAC 879
|..| .|||| |||.|.|||.|||| ||| .||||.|||.|.
BPUM_0451___a 821 ATGA---ATTAATCAAGCAGCAGCTGCTGACGAATGGAGAGCTATCAAAT 867
BSNT_01344___ 880 ATTGAACAGCG--TGTCAGC-GAATCGATTGAAAAAGCCGTTTCGTTCAG 926
||||| |||| ||| ||| ||..||||.||..|||||||....|||||
BPUM_0451___a 868 ATTGA--AGCGGCTGT-AGCAGATGCGATAGATGAAGCCGTAAGATTCAG 914
BSNT_01344___ 927 CGAAGACAGTCCATATCCAAAAGATTCGGAGCTGCTGACAGATGTGTACG 976
.|||||.|||..||||||..|..||.||||..|||||||.||||||||.|
BPUM_0451___a 915 TGAAGAAAGTGAATATCCCGATCATACGGAATTGCTGACTGATGTGTATG 964
BSNT_01344___ 977 TGTCATATGAAAAAGGAGGAATGTAA 1002
|.||.|||.||.||
BPUM_0451___a 965 TTTCGTATCAATAA------------ 978
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