Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00812 and BPUM_0449

See Amino acid alignment / Visit BSNT_00812 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:35
# Commandline: needle
#    -asequence dna-align/BSNT_00812.1.24716.seq
#    -bsequence dna-align/BPUM_0449.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00812-BPUM_0449.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00812-BPUM_0449.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00812
# 2: BPUM_0449
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 137
# Identity:      93/137 (67.9%)
# Similarity:    93/137 (67.9%)
# Gaps:          25/137 (18.2%)
# Score: 356.5
# 
#
#=======================================

BSNT_00812         1 ATGCCAAATTGGCTTAAAAAGCAGATGCAAAAAGCGTTCCTTGAAAAAGA     50
                     |||||.||.|||||.|||||.||||||||.||.||.||..||||||||.|
BPUM_0449          1 ATGCCCAACTGGCTGAAAAATCAGATGCAGAAGGCTTTTTTTGAAAAAAA     50

BSNT_00812        51 TAATTACCAAATTAAACTGCTGAATCAATGCTGGTATTTCTATAGGAAAA    100
                     |.||||||||||.||..||||.||||||||||||||.|||||.||.||||
BPUM_0449         51 TCATTACCAAATCAAGTTGCTAAATCAATGCTGGTACTTCTACAGAAAAA    100

BSNT_00812       101 AACACT-----GC-TCGTAA-----------------    114
                     ||||.|     || ||  ||                 
BPUM_0449        101 AACATTCAGTCGCATC--AAGGCACACCCCATCCTGA    135


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