Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00805 and BPUM_0447
See
Amino acid alignment /
Visit
BSNT_00805 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:35
# Commandline: needle
# -asequence dna-align/BSNT_00805___rsbX.1.24716.seq
# -bsequence dna-align/BPUM_0447___rsbX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00805___rsbX-BPUM_0447___rsbX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00805___rsbX-BPUM_0447___rsbX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00805___rsbX
# 2: BPUM_0447___rsbX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 645
# Identity: 418/645 (64.8%)
# Similarity: 418/645 (64.8%)
# Gaps: 90/645 (14.0%)
# Score: 1231.0
#
#
#=======================================
BSNT_00805___ 1 ATGATCCAGGTTGAAGAAAACGAGCATATTCAAACTCTAGTA--TATCAA 48
||||..|||.|||||.|..|.||||||.| .||..|.|.|| ||||||
BPUM_0447___r 1 ATGAAACAGATTGAACAGCATGAGCATGT--GAATGCCATTATCTATCAA 48
BSNT_00805___ 49 CTGAATAAAGAAGGGAAATCGAT-TTGCGGTGACAGCTTTTTTATGAAAG 97
..|||||||||||||||||| || .|||||.|||||.||||||||.||||
BPUM_0447___r 49 TCGAATAAAGAAGGGAAATC-ATGCTGCGGGGACAGTTTTTTTATTAAAG 97
BSNT_00805___ 98 CTGATGATAAGGAGTTAATTTGCGCGGTTGCTGACGGACTGGGAAGTGGA 147
|.||||||.|.||..|||||||.||.||.||.||||||.|.||.||.||
BPUM_0447___r 98 CAGATGATGAAGAACTAATTTGTGCTGTGGCAGACGGATTAGGCAGCGG- 146
BSNT_00805___ 148 TCACTT-GCTAACGAATCCTCTGC---AGCCATC-AAAGACTTAGTGGAA 192
|||.|| ||.||.|||||.|||.| ||.||.| ||| |.||.|||
BPUM_0447___r 147 TCAGTTCGCCAATGAATCATCTTCTTTAGTCAGCGAAA----TTGTCGAA 192
BSNT_00805___ 193 AACTATG----CGAG----TGAAGACGTAGAAAGCATTATCGAACGCTGT 234
.|.|||| .||| |||.||| |.|.||.||..|.||.
BPUM_0447___r 193 GAATATGGACATGAGGATATGACGAC--------CCTCATTGACAGATGC 234
BSNT_00805___ 235 AATCAGGCGATGAAAAACAAAAGAGGCGCTACAGCATCT----ATCCTGA 280
|||||||||||||||||.|||.|.||.||.|| |.| |||.|.|
BPUM_0447___r 235 AATCAGGCGATGAAAAATAAACGCGGAGCCAC----TGTTGGGATCTTAA 280
BSNT_00805___ 281 AAATCAATTTT---GAGCAAAGGCAGTTTACGTACTGCTCTGTCGGAAAT 327
|..|.|||||| .|||| |||||||||.||.||.||.||.||.|||
BPUM_0447___r 281 AGGTGAATTTTTCCCAGCA---GCAGTTTACCTATTGTTCGGTTGGTAAT 327
BSNT_00805___ 328 GTACGGTTTATTCTGCATTCCCCGTCTGGTGAAAGCT---TTTATCCTCT 374
.|.|||||.||..||.||.||||.|||||.|| || |||||||.||
BPUM_0447___r 328 ATTCGGTTCATCTTGAATGCCCCTTCTGGCGA---CTATATTTATCCACT 374
BSNT_00805___ 375 GCCGATTTCGGGCTATTTATCAGGCAAGCCGCAAAAATACAAAACGCACA 424
.||.|..||.||.||.||||||||.||.||...||||||.|||||..|||
BPUM_0447___r 375 TCCTACATCAGGATACTTATCAGGGAAACCTAGAAAATATAAAACATACA 424
BSNT_00805___ 425 CCGCCACCTATGAAAAGGGTTCAAAGTTCATTATACATACAGATGGACTC 474
||....||||.|||||.||.||.|..||||||||..||.||||.|||||.
BPUM_0447___r 425 CCTATTCCTACGAAAAAGGATCGACATTCATTATGTATTCAGACGGACTG 474
BSNT_00805___ 475 AACGT-----ACCTGATATCCGCTCCCA----TTTAAAAAAAGGCCAATC 515
||.|| ||.|||.| | ||||||..|..|.||.||
BPUM_0447___r 475 AATGTGCCAAACATGAGA---------ATGTGTTTAAAGCATAGTCATTC 515
BSNT_00805___ 516 GGTAGAAGAAATATCG------AATTCGCTGAAGATGTATACGACATCGA 559
.||.|||| ||||.| ||.| |||| |..||||| ||| |
BPUM_0447___r 516 AGTTGAAG--ATATTGCCAAACAACT---TGAA-ACATATAC-ACA---A 555
BSNT_00805___ 560 GA----AAAGATGACCTGACCTATATTCTCGGACAGCTGTCCTAG 600
|| ||.||.||.||.||||||.|.||.||.|||||..|.||.
BPUM_0447___r 556 GACAAGAAGGACGATCTCACCTATGTACTTGGTCAGCTTACGTAA 600
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.