Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00803 and BPUM_0445

See Amino acid alignment / Visit BSNT_00803 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:34
# Commandline: needle
#    -asequence dna-align/BSNT_00803___rsbW.1.24716.seq
#    -bsequence dna-align/BPUM_0445___rsbW.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00803___rsbW-BPUM_0445___rsbW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00803___rsbW-BPUM_0445___rsbW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00803___rsbW
# 2: BPUM_0445___rsbW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity:     380/498 (76.3%)
# Similarity:   380/498 (76.3%)
# Gaps:          24/498 ( 4.8%)
# Score: 1407.5
# 
#
#=======================================

BSNT_00803___      1 ATGAA-GAA----TAATGCTGAT-TACATCGAAATGAAAGTGCCGGCCCA     44
                     ||||| |||    ||     ||| || |||||.||||||.|.|||||..|
BPUM_0445___r      1 ATGAACGAAACAGTA-----GATCTA-ATCGAGATGAAAATACCGGCGAA     44

BSNT_00803___     45 ACCTGAATATGTGGGAATTATAAGACTGACGCTGTCAGGGGTCGCAAGCA     94
                     |||.||||||||.||.||.||..|.|||||.||.|||||.||.||.|||.
BPUM_0445___r     45 ACCAGAATATGTAGGCATCATTCGCCTGACTCTTTCAGGCGTAGCGAGCC     94

BSNT_00803___     95 GAATGGGCTATACGTACGATGAAATTGAAGACTTGAAAATCGCAGTCAGT    144
                     |||||||||||...|||||.||.|||||||||||.|||||.||.||||||
BPUM_0445___r     95 GAATGGGCTATGTCTACGAAGAGATTGAAGACTTAAAAATTGCCGTCAGT    144

BSNT_00803___    145 GAGGCGTGCACAAATGCGGTTCAGCACGCTTACAAAG---AAGA---TAA    188
                     |||||.||.||||||||.||||||||.||.||.||||   ||||   |.|
BPUM_0445___r    145 GAGGCTTGTACAAATGCAGTTCAGCATGCCTATAAAGGAAAAGACGGTGA    194

BSNT_00803___    189 AAATGGGGAAGTGTCAATACGATTCGGTGTGTTTGAAGACCGTTTAGAGG    238
                     |.||||.||.||..|..|.||.||...|||.|..|||||.|||.||||..
BPUM_0445___r    195 AGATGGAGAGGTAGCTGTTCGCTTTCTTGTCTACGAAGATCGTCTAGAAA    244

BSNT_00803___    239 TTATTGTGGCGGATGAAGGAGACAGCTTTGACTTTGATCAAAAGCAGCAG    288
                     |.|||||.||.||..||||.|..||||||||||||.|.||||||||..|.
BPUM_0445___r    245 TCATTGTCGCTGACAAAGGCGGTAGCTTTGACTTTAAGCAAAAGCAAGAA    294

BSNT_00803___    289 GATCTAGGGCCGTACACACCTTCGCACACAGTTGATCAATTATCAGAAGG    338
                     ||.||.||.|||||.|||.||.|.||.||.||.||||||||..|||||||
BPUM_0445___r    295 GACCTCGGACCGTATACAACTGCTCATACGGTGGATCAATTGGCAGAAGG    344

BSNT_00803___    339 AGGGCTCGGTCTATATTTAATGGAAACGCTCATGGATGAAGTCAGA-GTG    387
                     |||.||.|||.||||.||||||.||||..|.|||||||||||| || |||
BPUM_0445___r    345 AGGTCTTGGTTTATACTTAATGCAAACATTGATGGATGAAGTC-GAGGTG    393

BSNT_00803___    388 CAA--AACCACTCCGGCGTCACCGTAGCGATGACAAAGTATTTAAATGGG    435
                     |||  ||  |||||||.||.|||||.|||||||||||||.||||||..||
BPUM_0445___r    394 CAAGCAA--ACTCCGGAGTTACCGTTGCGATGACAAAGTTTTTAAACAGG    441

BSNT_00803___    436 GAGCGAGTTGATCATGACACAACCATCAAAAACTACGAAACTAACTAA    483
                     |||||||||||.|||||||||||||||.|||||||.||||||||||||
BPUM_0445___r    442 GAGCGAGTTGACCATGACACAACCATCCAAAACTATGAAACTAACTAA    489


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