Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00799 and BPUM_0441
See
Amino acid alignment /
Visit
BSNT_00799 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:34
# Commandline: needle
# -asequence dna-align/BSNT_00799___rsbS.1.24716.seq
# -bsequence dna-align/BPUM_0441___rsbS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00799___rsbS-BPUM_0441___rsbS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00799___rsbS-BPUM_0441___rsbS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00799___rsbS
# 2: BPUM_0441___rsbS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity: 293/372 (78.8%)
# Similarity: 293/372 (78.8%)
# Gaps: 9/372 ( 2.4%)
# Score: 1114.0
#
#
#=======================================
BSNT_00799___ 1 TTGAGA---CATCCGAAAATCCCGATCTTGAAACTGTATAATTG-CTTAT 46
|||||| ||.|||||.||.||.|||||.|||.|.|||||.|| |||.|
BPUM_0441___r 1 TTGAGAAATCACCCGAAGATTCCAATCTTAAAATTATATAACTGTCTTCT 50
BSNT_00799___ 47 TAGTATCCATTCAATGGGAACTTGATGACCAGACAGC-ATTAACTTTTCA 95
.| |.||.||.||.|||||.||||||||.||.||||| .||.|| |||||
BPUM_0441___r 51 GA-TTTCAATACAGTGGGAGCTTGATGATCAAACAGCTCTTCAC-TTTCA 98
BSNT_00799___ 96 AGAAGACTTATTAAATAAAATATACGAAACAGGTGCTAACGGAGTCGTCA 145
||||||||||.|.||||||||..|.||||||||.||.|||||.||.||||
BPUM_0441___r 99 AGAAGACTTACTGAATAAAATTCATGAAACAGGAGCAAACGGTGTTGTCA 148
BSNT_00799___ 146 TTGACCTGACATCTGTGGATATGATTGATTCATTTATCGCGAAAGTGCTG 195
||||..|.|||||.||.|||||||||||||||||||||||.||.||..|.
BPUM_0441___r 149 TTGATTTAACATCCGTCGATATGATTGATTCATTTATCGCTAAGGTATTA 198
BSNT_00799___ 196 GGCGACGTCATTACAATGTCTAAGTTAATGGGGGCTAAAGTCGTCTTGAC 245
|||||.||.||.||.|||||||||.|.||||||||.|||||.||.||.||
BPUM_0441___r 199 GGCGATGTGATCACCATGTCTAAGCTCATGGGGGCAAAAGTTGTATTAAC 248
BSNT_00799___ 246 CGGCATTCAGCCCGCTGTGGCAGTGACGCTGATTGAACTTGGAATCGCGC 295
.||.||.||.||.||.||.||.||||||||.|||||||||||.||..|||
BPUM_0441___r 249 AGGAATACAACCGGCAGTCGCTGTGACGCTTATTGAACTTGGTATATCGC 298
BSNT_00799___ 296 TTGAGGAAATCGAAACTGCGCTCGA-CTTAGAGCAGGGGCTTGAGACATT 344
|.||.|||||..||||.||.||.|| ||| ||.||.||||||||||||.|
BPUM_0441___r 299 TGGAAGAAATACAAACAGCACTAGATCTT-GAACAAGGGCTTGAGACACT 347
BSNT_00799___ 345 GAAGCGGGAATTGGGGGAATAG 366
||||||||||||||||||||||
BPUM_0441___r 348 GAAGCGGGAATTGGGGGAATAG 369
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.