Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00797 and BPUM_0439

See Amino acid alignment / Visit BSNT_00797 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:34
# Commandline: needle
#    -asequence dna-align/BSNT_00797___ydcE.1.24716.seq
#    -bsequence dna-align/BPUM_0439___ydcE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00797___ydcE-BPUM_0439___ydcE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00797___ydcE-BPUM_0439___ydcE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00797___ydcE
# 2: BPUM_0439___ydcE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity:     301/351 (85.8%)
# Similarity:   301/351 (85.8%)
# Gaps:           0/351 ( 0.0%)
# Score: 1305.0
# 
#
#=======================================

BSNT_00797___      1 TTGATTGTGAAACGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGT     50
                     ||||||||.||||||||.||||||||.|||||||||||||||||||||||
BPUM_0439___y      1 TTGATTGTTAAACGCGGTGATGTTTACTTTGCTGATTTATCTCCTGTTGT     50

BSNT_00797___     51 TGGCTCAGAGCAAGGCGGGGTGCGCCCGGTCTTAGTGATCCAAAATGACA    100
                     ||||||.|||||.||||||||.|||||.||.||.|||||.||||||||||
BPUM_0439___y     51 TGGCTCCGAGCAGGGCGGGGTTCGCCCAGTATTGGTGATTCAAAATGACA    100

BSNT_00797___    101 TCGGAAATCGCTTCAGCCCAACTGCTATTGTTGCAGCCATAACAGCACAA    150
                     |.|||||||||||||||||.||||||||.|||||||||||||||||.|||
BPUM_0439___y    101 TTGGAAATCGCTTCAGCCCGACTGCTATCGTTGCAGCCATAACAGCCCAA    150

BSNT_00797___    151 ATACAGAAAGCGAAATTACCAACCCACGTCGAAATCGATGCAAAACGCTA    200
                     |||||.||||||||||||||.||.|||||||||||..|||||||.||.||
BPUM_0439___y    151 ATACAAAAAGCGAAATTACCGACTCACGTCGAAATTAATGCAAAGCGGTA    200

BSNT_00797___    201 CGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATTCGGACGATTG    250
                     |||.||||||.|||||||.||.|||.|..|.||.||||||||.||.||.|
BPUM_0439___y    201 CGGCTTTGAACGAGATTCTGTCATTCTTTTAGAACAAATTCGTACAATCG    250

BSNT_00797___    251 ACAAGCAAAGGTTAACGGATAAGATTACTCATCTGGATGATGAAATGATG    300
                     |.||.|||||..|.||.|||||.||.||.|||||.||||||||.||||||
BPUM_0439___y    251 ATAAACAAAGACTGACAGATAAAATCACACATCTTGATGATGAGATGATG    300

BSNT_00797___    301 GATAAGGTTGATGAAGCCTTACAAATCAGTTTGGCACTCATTGATTTTTA    350
                     ||.|||||||||||||||||||||.|.||||||||.||.|||||||||||
BPUM_0439___y    301 GAGAAGGTTGATGAAGCCTTACAAGTTAGTTTGGCTCTTATTGATTTTTA    350

BSNT_00797___    351 G    351
                     .
BPUM_0439___y    351 A    351


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