Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00797 and BPUM_0439
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:34
# Commandline: needle
# -asequence dna-align/BSNT_00797___ydcE.1.24716.seq
# -bsequence dna-align/BPUM_0439___ydcE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00797___ydcE-BPUM_0439___ydcE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00797___ydcE-BPUM_0439___ydcE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00797___ydcE
# 2: BPUM_0439___ydcE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 301/351 (85.8%)
# Similarity: 301/351 (85.8%)
# Gaps: 0/351 ( 0.0%)
# Score: 1305.0
#
#
#=======================================
BSNT_00797___ 1 TTGATTGTGAAACGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGT 50
||||||||.||||||||.||||||||.|||||||||||||||||||||||
BPUM_0439___y 1 TTGATTGTTAAACGCGGTGATGTTTACTTTGCTGATTTATCTCCTGTTGT 50
BSNT_00797___ 51 TGGCTCAGAGCAAGGCGGGGTGCGCCCGGTCTTAGTGATCCAAAATGACA 100
||||||.|||||.||||||||.|||||.||.||.|||||.||||||||||
BPUM_0439___y 51 TGGCTCCGAGCAGGGCGGGGTTCGCCCAGTATTGGTGATTCAAAATGACA 100
BSNT_00797___ 101 TCGGAAATCGCTTCAGCCCAACTGCTATTGTTGCAGCCATAACAGCACAA 150
|.|||||||||||||||||.||||||||.|||||||||||||||||.|||
BPUM_0439___y 101 TTGGAAATCGCTTCAGCCCGACTGCTATCGTTGCAGCCATAACAGCCCAA 150
BSNT_00797___ 151 ATACAGAAAGCGAAATTACCAACCCACGTCGAAATCGATGCAAAACGCTA 200
|||||.||||||||||||||.||.|||||||||||..|||||||.||.||
BPUM_0439___y 151 ATACAAAAAGCGAAATTACCGACTCACGTCGAAATTAATGCAAAGCGGTA 200
BSNT_00797___ 201 CGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATTCGGACGATTG 250
|||.||||||.|||||||.||.|||.|..|.||.||||||||.||.||.|
BPUM_0439___y 201 CGGCTTTGAACGAGATTCTGTCATTCTTTTAGAACAAATTCGTACAATCG 250
BSNT_00797___ 251 ACAAGCAAAGGTTAACGGATAAGATTACTCATCTGGATGATGAAATGATG 300
|.||.|||||..|.||.|||||.||.||.|||||.||||||||.||||||
BPUM_0439___y 251 ATAAACAAAGACTGACAGATAAAATCACACATCTTGATGATGAGATGATG 300
BSNT_00797___ 301 GATAAGGTTGATGAAGCCTTACAAATCAGTTTGGCACTCATTGATTTTTA 350
||.|||||||||||||||||||||.|.||||||||.||.|||||||||||
BPUM_0439___y 301 GAGAAGGTTGATGAAGCCTTACAAGTTAGTTTGGCTCTTATTGATTTTTA 350
BSNT_00797___ 351 G 351
.
BPUM_0439___y 351 A 351
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