Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00774 and BPUM_0424

See Amino acid alignment / Visit BSNT_00774 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:32
# Commandline: needle
#    -asequence dna-align/BSNT_00774___ydbL.1.24716.seq
#    -bsequence dna-align/BPUM_0424___ydbL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00774___ydbL-BPUM_0424___ydbL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00774___ydbL-BPUM_0424___ydbL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00774___ydbL
# 2: BPUM_0424___ydbL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity:     241/354 (68.1%)
# Similarity:   241/354 (68.1%)
# Gaps:          36/354 (10.2%)
# Score: 746.0
# 
#
#=======================================

BSNT_00774___      1 TTGAGGAACTTTATTACCGCTTTACCGATTGTATTGCTGCT-TGGATTCT     49
                     .|||..||.||.|||||.||||||||.|||.|.|||||||| |.| ||.|
BPUM_0424___y      1 GTGAAAAATTTCATTACGGCTTTACCTATTTTGTTGCTGCTGTCG-TTTT     49

BSNT_00774___     50 CATTTGTGTCATTCATG--TTTCAGTTTGAACATCTTGTTTATTTCAGGC     97
                     |.||||||||.||  ||  ||.||||||||.||||||.||||||||||.|
BPUM_0424___y     50 CGTTTGTGTCTTT--TGCCTTCCAGTTTGATCATCTTATTTATTTCAGAC     97

BSNT_00774___     98 TCGCGCTTGGGTTGTTTTCTCTCGTGGGACTGTACATGATATATA-----    142
                     |.|||||.||..|.|||||..|.|..||.||.|.|.|..|.||||     
BPUM_0424___y     98 TAGCGCTGGGAATCTTTTCGTTAGCCGGTCTTTTCTTTCTGTATACACTT    147

BSNT_00774___    143 AAATGAAGACGGGCATCCGCTAT--TTTATCATCTATCTGTATGCCAGCT    190
                     |||.|||     .|||  |..||  ||.||..|.|||.|.|||||.||||
BPUM_0424___y    148 AAAAGAA-----ACAT--GAAATGGTTCATGGTTTATTTATATGCGAGCT    190

BSNT_00774___    191 GGATTGTGTTGGCCGCAGTGACCGCTTTTGAAGAGCC--GATTTTCTCAA    238
                     ||||..|..|.||.||.||.||..|.|||||.|||||  ..|||||||| 
BPUM_0424___y    191 GGATCATTCTTGCTGCTGTCACAACATTTGAGGAGCCTGTCTTTTCTCA-    239

BSNT_00774___    239 GCTTTTTCTTTGGCGGCCTGGT-----GATGACGATGGGTTACCTGACAT    283
                      .||.||||||||     ||||     .|||||.||||||||.||.||||
BPUM_0424___y    240 -GTTCTTCTTTGG-----TGGTTTAACAATGACCATGGGTTATCTCACAT    283

BSNT_00774___    284 ATATGCTGATTTATCTCGGCATGAAACAAGACCGGGATGC-AAATCCTGT    332
                     |||||||.||||||.|.||.|||||.||.|||||.|..|| |||| ||..
BPUM_0424___y    284 ATATGCTCATTTATTTAGGAATGAAGCAGGACCGTGTAGCGAAAT-CTCA    332

BSNT_00774___    333 GTAA    336
                     .|||
BPUM_0424___y    333 TTAA    336


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