Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00767 and BPUM_0419
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:32
# Commandline: needle
# -asequence dna-align/BSNT_00767___dctP.1.24716.seq
# -bsequence dna-align/BPUM_0419___dctP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00767___dctP-BPUM_0419___dctP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00767___dctP-BPUM_0419___dctP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00767___dctP
# 2: BPUM_0419___dctP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1282
# Identity: 987/1282 (77.0%)
# Similarity: 987/1282 (77.0%)
# Gaps: 29/1282 ( 2.3%)
# Score: 3754.0
#
#
#=======================================
BSNT_00767___ 1 ATGAA---ACTGTTTAAAAATTTAACAGTTCAGGTCATAACCGCGGTCAT 47
||||| .||.||.||.||..|.|||.|||||||..|..|.||.|||||
BPUM_0419___d 1 ATGAAGAGGCTTTTGAAGAACCTGACATTTCAGGTGGTTGCAGCTGTCAT 50
BSNT_00767___ 48 CATCGGGGTCATTGTCGGGCTGGTCTGGCCGGATGTCGGCAAAGAAATGA 97
.||||||.|||||||.|||.||||.|||||..|.|||||.||||||||||
BPUM_0419___d 51 TATCGGGATCATTGTTGGGATGGTTTGGCCAAACGTCGGAAAAGAAATGA 100
BSNT_00767___ 98 AACCGCTTGGCGATACATTTATCAACGCTGTTAAAATGGTGATCGCACCA 147
|.|||||.||.||.||.||||||||.||.|||||||||||.||.||||||
BPUM_0419___d 101 AGCCGCTCGGTGACACCTTTATCAATGCCGTTAAAATGGTCATTGCACCA 150
BSNT_00767___ 148 ATTATTTTCTTCACAATCGTTCTCGGGATTGCAAAAATGGGCGATATGAA 197
|||||||||||.||.||.|||||.||.|||||.||||||||.||||||||
BPUM_0419___d 151 ATTATTTTCTTAACCATTGTTCTTGGTATTGCCAAAATGGGGGATATGAA 200
BSNT_00767___ 198 GAAGGTTGGAAAAGTAGGGGGAAAAGCGTTTATCTATTTCGAGGTTGTCA 247
.||||||||||||||.|||||||||||.|||||.|||||.||.||.||||
BPUM_0419___d 201 AAAGGTTGGAAAAGTTGGGGGAAAAGCATTTATTTATTTTGAAGTCGTCA 250
BSNT_00767___ 248 CCACCCTCGCACTCATTATCGGTTTATTTGTCGTCAATATTATGAAGCCG 297
|.||.||.||..|..|.|||||..|.||||||||.|||||.||||||||.
BPUM_0419___d 251 CGACGCTTGCCTTGGTCATCGGACTTTTTGTCGTAAATATCATGAAGCCA 300
BSNT_00767___ 298 GGTGCGGGTCTTGATTACAGCAAGCTTGAAAAGGGAGATGTATCACAATA 347
|||||.|||||.||.||.||.|||||||||||.||.||.||.||.||.||
BPUM_0419___d 301 GGTGCAGGTCTGGACTATAGTAAGCTTGAAAAAGGGGACGTTTCGCAGTA 350
BSNT_00767___ 348 CACGCAAAATGGCGGTCAGGGAATCGACTGGATTGAATTTGTTACACACA 397
.||.||||||||.||.|||||.|||||||||||.||||||||||||||||
BPUM_0419___d 351 TACCCAAAATGGGGGACAGGGTATCGACTGGATGGAATTTGTTACACACA 400
BSNT_00767___ 398 TTGTTCCATCCAATATGGTTGATGCCTTCGCAAAAGGGGACATTTTGCAG 447
|.||.|||||.||||||||.||||||||.|||||.||.||.|||||.|||
BPUM_0419___d 401 TCGTACCATCTAATATGGTAGATGCCTTTGCAAAGGGTGATATTTTACAG 450
BSNT_00767___ 448 GTCTTATTCTTTTCTATTCTTTTCGGAGTGGGTCTTGCGGCATTAGGCGA 497
|||||||||||.||.|||.|.|||||.||.|..||.||.||..|.|||||
BPUM_0419___d 451 GTCTTATTCTTCTCAATTTTATTCGGTGTTGCACTCGCTGCCCTTGGCGA 500
BSNT_00767___ 498 AAAAGGGAAAAGCGTCATTG-ATTTCTTCGACAAGGTTTCTCACGTTTTT 546
.||.||||||.||.||||.| ||..||| ||.|||.|.||.|..|||||.
BPUM_0419___d 501 TAAGGGGAAAGGCATCATCGAATGGCTT-GATAAGCTGTCACTTGTTTTC 549
BSNT_00767___ 547 TTCAAAATTATCGGCTACATTATGCGTGCCGCGCCAATCGGGGCATTCGG 596
||.|||||.||.||.||.||.||||||||.|||||..||||.|||||.||
BPUM_0419___d 550 TTTAAAATCATTGGATATATCATGCGTGCAGCGCCGCTCGGTGCATTTGG 599
BSNT_00767___ 597 GGCGATGGCGTATACAATCGGACACTTCG----GGC-TCGATTCCATCAA 641
|||.|||||||||||.|||||||||||.| ||| |||||| ||
BPUM_0419___d 600 GGCAATGGCGTATACGATCGGACACTTTGGTTTGGCGTCGATT-----AA 644
BSNT_00767___ 642 ACCGCTGGCAAGCTTAATGATGTCTGTTTATATTACGATGTTCCTGTTCG 691
||||||.|||||..|.|||.|.||.||||||.|.|||||||||||||||.
BPUM_0419___d 645 ACCGCTCGCAAGTCTGATGCTCTCCGTTTATTTGACGATGTTCCTGTTCA 694
BSNT_00767___ 692 TATTTGTTGCTTTAAATATCATCTGCAAGCTTTACGGATTCAGCCTG--T 739
|.||.||||...|.||.|||||.||.||..|.||.||.|||||.||| |
BPUM_0419___d 695 TCTTCGTTGTGCTGAACATCATTTGTAAAATGTATGGTTTCAGTCTGCTT 744
BSNT_00767___ 740 GGAATTACCTTCGCTTCATTAAGGATGAGCTTCTGATCGTGCTTGGCACA 789
|| ||||||.||.||.||.||||||||..||.|.||.||.|||||||||
BPUM_0419___d 745 GG--TTACCTGCGATTTATCAAGGATGAAATTTTAATTGTTCTTGGCACA 792
BSNT_00767___ 790 AGCTCTTCCGAATCGGTGCTTCCGCGTATGATGGATAAAATGGAGCGCTA 839
|||||.||.|||||.|||||.||..|.|||||||||||||||||.|||||
BPUM_0419___d 793 AGCTCATCAGAATCCGTGCTGCCAAGAATGATGGATAAAATGGAACGCTA 842
BSNT_00767___ 840 CGGCTGTTCCAAATCCGTTGTCGGGCTAGTTATTCCGACGGGCTATTCGT 889
|||.||.||.||.||.|||||.||.||.||.||.||.||.||.|||||.|
BPUM_0419___d 843 CGGGTGCTCTAAGTCTGTTGTGGGCCTTGTCATCCCAACAGGGTATTCCT 892
BSNT_00767___ 890 TTAACCTCGACGGCACATCCATTTATTTATCAATGGCGACTGTCTTTCTG 939
|||||.|.|||||.||.||.||.||||||||.|||||....||||||.|.
BPUM_0419___d 893 TTAACTTAGACGGAACCTCGATCTATTTATCGATGGCTGTGGTCTTTTTA 942
BSNT_00767___ 940 GCACAGGTGTTTGGAGTAGACCTCAGC-ATCGGCCAGCAAATTACGATTA 988
||.||.||||||||.|||||||| |.| |||||.||||||||.||.||||
BPUM_0419___d 943 GCGCAAGTGTTTGGTGTAGACCT-ATCTATCGGTCAGCAAATCACCATTA 991
BSNT_00767___ 989 TCCTCGTTCTGATGCTGACATCGAAGGGAGCGGCAGGTGTGACAGGAAGC 1038
||||.|||||||||||.||.||.|||||.|||||.||.||||||||||||
BPUM_0419___d 992 TCCTTGTTCTGATGCTAACTTCAAAGGGCGCGGCTGGGGTGACAGGAAGC 1041
BSNT_00767___ 1039 GGATTTATCGTCCTTGCCTCAACGCTGTCAGCGCTGCAGGTCATTCCGCT 1088
|||||||||||.||.||.||.||.||..|.||.||.||||||||||||||
BPUM_0419___d 1042 GGATTTATCGTGCTCGCTTCTACCCTTGCTGCACTACAGGTCATTCCGCT 1091
BSNT_00767___ 1089 GGAGGGTCTTGCACTCCTGCTCGGGGTCGACCGTTTCATGAGTGAAGGAA 1138
.|||||.||||||||.|||||.||.||.|||||.||||||||.|||||||
BPUM_0419___d 1092 AGAGGGGCTTGCACTTCTGCTTGGCGTAGACCGATTCATGAGCGAAGGAA 1141
BSNT_00767___ 1139 GAGCCATTGTGAACCTAATCGGAAACGGAATCGCCACGATCATTGTTGCC 1188
|||||||....|||||.||.|||||.||||||||.||.||..||||.||.
BPUM_0419___d 1142 GAGCCATCACAAACCTCATTGGAAATGGAATCGCGACAATTGTTGTGGCG 1191
BSNT_00767___ 1189 AAAAGCGAAAATGAATTTGATGAAGCAAAAAGCGTAGAGGCTGTTGAAGG 1238
|||||.|||..|||||||||.||.||.||.|||..|...||..||.|||.
BPUM_0419___d 1192 AAAAGTGAAGGTGAATTTGACGAGGCGAAGAGCAAAACAGCCCTTCAAGA 1241
BSNT_00767___ 1239 CATGAAAAAAATGAAAACAGCAGTCTGA---- 1266
.|||...||.|||| ||||..|||.
BPUM_0419___d 1242 AATGCGCAATATGA----AGCAAGCTGTATAG 1269
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