Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00765 and BPUM_0417
See
Amino acid alignment /
Visit
BSNT_00765 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:32
# Commandline: needle
# -asequence dna-align/BSNT_00765___dctS.1.24716.seq
# -bsequence dna-align/BPUM_0417___dctS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00765___dctS-BPUM_0417___dctS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00765___dctS-BPUM_0417___dctS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00765___dctS
# 2: BPUM_0417___dctS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1695
# Identity: 1055/1695 (62.2%)
# Similarity: 1055/1695 (62.2%)
# Gaps: 318/1695 (18.8%)
# Score: 3341.5
#
#
#=======================================
BSNT_00765___ 1 ATGAACAAAAAGAAGCTCTCAATCCGTTGGAAAATCACGATCTTATCCTA 50
BPUM_0417___d 0 -------------------------------------------------- 0
BSNT_00765___ 51 TATACTCGTCATTTTCTCCTTTTTGATCGGCGGCATTGTGCTCATCGGCA 100
BPUM_0417___d 0 -------------------------------------------------- 0
BSNT_00765___ 101 ACATTCAGCATACAGAGGAGCGGGAGCTGAAAAAGCGGCTGATGAATACG 150
|||||.||.
BPUM_0417___d 1 -----------------------------------------ATGAACACA 9
BSNT_00765___ 151 GCCCGGACGGTGTCAGAGATGACAGAAGTGAAAG-AAGCCTTGGC-GCGA 198
||..|.||.|||.|.|||||||..||.|| |||| |.||.||.|| |
BPUM_0417___d 10 GCGAGAACAGTGGCTGAGATGAATGAGGT-AAAGCAGGCGTTAGCTG--- 55
BSNT_00765___ 199 AAAAAACAAACAGAAGCTG------TTCGCCATGCGGTTGAAGAAATCAG 242
|..||||||| .|||..|| |.|..|||||..|.||.||.||..|
BPUM_0417___d 56 ATCAAACAAA-GGAACGTGACCGATTACAGCATGCCATCGAGGAGATTCG 104
BSNT_00765___ 243 GATGATTAATGAAGCAGACTATATTGTCGTCATGGATATGAATCACATCC 292
|||.|||.|.||.||.|||||.||||||||||||||||||.||||..|..
BPUM_0417___d 105 GATTATTCAAGATGCTGACTACATTGTCGTCATGGATATGGATCATGTGA 154
BSNT_00765___ 293 GA-TATACGCATCCTGTCAGCACAAGCATCGGCAAAAAATCA-------G 334
|| || ||||||||.||.|...||||.||.|| ||| |
BPUM_0417___d 155 GACTA-ACGCATCCAGTGAAAGCAAGGATTGG-------TCAGCGCTCGG 196
BSNT_00765___ 335 AAGGTGCAGACGAGGAGGCAGCGTTTGCGGAGCACATTTATTTCTCTGAA 384
|.||..||||.||.|||.|.||.|||||.|||||||||||||||||.|||
BPUM_0417___d 197 AGGGGACAGATGAAGAGCCTGCTTTTGCTGAGCACATTTATTTCTCAGAA 246
BSNT_00765___ 385 GCAAAGGGCGAGATCGGCACGGCGGTTCGCGCTTTTTATCCGGTTAAGGA 434
|||.||||.|||.|.||.||.||..|..|.||.||||||||.||.|||||
BPUM_0417___d 247 GCAGAGGGAGAGCTTGGGACCGCCATCAGAGCCTTTTATCCAGTGAAGGA 296
BSNT_00765___ 435 TCAAGACTTGAACCAAATAGGCGTGGTGCTTGTCGGAAAAACGCTGCCGG 484
|.|..|.||.||.||||.|||.||.||.|||||.||.|.|||.|||||..
BPUM_0417___d 297 TGATCAATTTAATCAAACAGGGGTCGTCCTTGTTGGGAGAACACTGCCAA 346
BSNT_00765___ 485 G---GATCGCTGACATCCTGCTTCATT--------TAAAGCGTGATATCG 523
| |||| ||.|| ||| |.|||||.||||||.
BPUM_0417___d 347 GTATGATC---GATAT--------ATTAGGAGAAATGAAGCGAGATATCC 385
BSNT_00765___ 524 CCTTCATCGTTGTGCTGACACTCGGCTTCGGCCTTGCTGGTTCCTTTTTG 573
.|.|.||..|..||||.||.|||.||||.||.||||..|||||.|||||.
BPUM_0417___d 386 TCATGATTCTCTTGCTCACGCTCAGCTTTGGGCTTGTCGGTTCATTTTTA 435
BSNT_00765___ 574 CTGGCCCGCCATATCAAAAAACAAATGTTTCAGCTTGAACCCCATGAGAT 623
||.||.||.|||||.|||.|.|||||||||.||||.||.||.||||||||
BPUM_0417___d 436 CTTGCTCGTCATATTAAACAGCAAATGTTTAAGCTGGAGCCGCATGAGAT 485
BSNT_00765___ 624 TGTCCGAATG-TATGAAGAACGGACAGCGACGTTTCACTCGATGAATGAA 672
||||.||||| || ||.||.||.||.||.||.||||||||.||.||||||
BPUM_0417___d 486 TGTCAGAATGCTA-GAGGAGCGCACCGCAACCTTTCACTCTATTAATGAA 534
BSNT_00765___ 673 GGGGTGATTGCCATTGACAATCGTCTCATCATTACGATTTTCAATGAAAA 722
|||||.||.||||||||.||||..|.|||.|||||.|||||.||||||||
BPUM_0417___d 535 GGGGTTATCGCCATTGATAATCAGCACATGATTACCATTTTTAATGAAAA 584
BSNT_00765___ 723 AGCGAAACAGATCTTTGAAGTG---CAGGGGGATCTGATCGGCAAGGTGA 769
.|||||.||.||.||| |||| || ||||||.|..|.||||||...|
BPUM_0417___d 585 GGCGAAGCAAATATTT--AGTGTGACA-GGGGATGTCGTAGGCAAGAATA 631
BSNT_00765___ 770 TTTGGGAGGTTCT--------CAAGGATTCGCGCCTGCCCGAAATCGTGG 811
|||||||.||.|| ||||| ||.||.||.|||.|.|
BPUM_0417___d 632 TTTGGGATGTGCTGTCTGACACAAGG--------CTTCCAGAGATCATTG 673
BSNT_00765___ 812 A----GCGGAACAAAGCAGTTTATAATGAAGAAATCCGTGTCAGCGGAAA 857
| |||||.| |.||.||||||||||||||.|.|.|.||||||||
BPUM_0417___d 674 ATCGCGCGGAGC----CCGTCTATAATGAAGAAATTCATATGAGCGGAAA 719
BSNT_00765___ 858 AGTCATCATGAGCAGCAGAATTCCGATCGTCATGAAGAAAAAAGTGATCG 907
....||.|||||.|||.||||||||||.||||||||.||.|||.|.||.|
BPUM_0417___d 720 GCGGATTATGAGTAGCCGAATTCCGATTGTCATGAAAAAGAAAATTATTG 769
BSNT_00765___ 908 GCGCCGTCGCGATTTTTCAGGACAGAACGGAAGCGGCCAAGATGGCAGAG 957
|.||.|||||.||||||||||||||.||.||||||.|.||..||||||||
BPUM_0417___d 770 GAGCGGTCGCCATTTTTCAGGACAGGACAGAAGCGACAAAATTGGCAGAG 819
BSNT_00765___ 958 GAATTGACTGGTGTCAGAAACTTTGTGGAGGCGCTCCGTGTCCAAAACCA 1007
||..|.||.||.||.|..||||||||.||.|..||.||.||.|||||.||
BPUM_0417___d 820 GAGCTAACCGGGGTTAAGAACTTTGTAGACGGTCTGCGGGTACAAAATCA 869
BSNT_00765___ 1008 TGAGCATATGAATAAGCTGCACACGATAGCCGGTCTCATCCAGCTGGGGA 1057
||||||||||||.|||||.||.|||||.||.||.||.||.|||||.||.|
BPUM_0417___d 870 TGAGCATATGAACAAGCTTCATACGATTGCTGGGCTGATTCAGCTAGGTA 919
BSNT_00765___ 1058 AATCTGAAAAAGC-CTTGCAGCTTGCATTCCAGGCGTC--AACTGAGCAG 1104
||.|.||..|.|| |||| |.||.||.||.||..||.| || |||||.
BPUM_0417___d 920 AACCCGATCAGGCACTTG-ATCTAGCCTTTCAAACGACGGAA--GAGCAA 966
BSNT_00765___ 1105 GAAAATGTGACT-GAATTTCTGCACCGCTCG----ATTCAAAATGACGCA 1149
|||.||||| || ||.|||||.|| ||| |||||..||||.||.
BPUM_0417___d 967 GAACATGTG-CTGGACTTTCTTCA----TCGGGTCATTCAGCATGATGCC 1011
BSNT_00765___ 1150 GCGGCAGGCCTTCTAT---TAAGTAAAATCAGAAGGGG-AAGAGAGCTCG 1195
|..||.|| |.||| |.||.|||||||||||||| ||| |||||.|
BPUM_0417___d 1012 GTTGCGGG---TTTATTGATGAGCAAAATCAGAAGGGGCAAG-GAGCTAG 1057
BSNT_00765___ 1196 GCATTGCTGTTCATATAGATGAAAACAGCAGTCTTCAGCAATTTCCC-GA 1244
|.||....||..|..||||.|||.|.|||..|||.| |..||||||| ||
BPUM_0417___d 1058 GTATAAAGGTCGAAGTAGACGAACAGAGCTATCTGC-GTGATTTCCCTGA 1106
BSNT_00765___ 1245 GCATATTGATCAGCATGATATTGTCG----TGCTTTTGGGGAATCTGATT 1290
||.|.|.|||||.||||||| ||.|| ||||| ||.||.||||||
BPUM_0417___d 1107 GCGTCTAGATCAACATGATA-TGACGAAGCTGCTT---GGCAACCTGATT 1152
BSNT_00765___ 1291 GAAAATGCCTTCGGCTCATTTGAAACCGTTCAATCTGA-AGAC---AAAC 1336
||.||||||||.|.|||.|.|||.||.||..|| | |||| |||.
BPUM_0417___d 1153 GAGAATGCCTTTGCCTCGTATGATACTGTAGAA----AGAGACACAAAAT 1198
BSNT_00765___ 1337 GAATTGACATTAGTATCGAACAAACAGATGATATCCTTGCTATTTTAATA 1386
|.|||...||||||||.||.|||||.||.|||.||||.||.||||||||.
BPUM_0417___d 1199 GCATTTCTATTAGTATTGATCAAACCGAGGATGTCCTCGCGATTTTAATT 1248
BSNT_00765___ 1387 GAAGATAACGGCTGCGGAATTGATCCGGCACAT-ATGCCTCGCCTTTACG 1435
|||||.||.||||.|||.|||||...|| |.|| ||.|||....|||.||
BPUM_0417___d 1249 GAAGACAATGGCTCCGGGATTGAAGAGG-AAATGATTCCTTATATTTTCG 1297
BSNT_00765___ 1436 ACAAAGGTTT----TACGGTCAATAAAACTGGCGGCACAGGCTATGGCCT 1481
|.|||||||| .||||..||.|| |||||.||||||||||||||
BPUM_0417___d 1298 ATAAAGGTTTCACACACGGCAAAGAA----GGCGGAACAGGCTATGGCCT 1343
BSNT_00765___ 1482 GTATCTAGTGAAACAAATCATAGACAAA-GGATCGGGCGCGA----TAGA 1526
||||.|.||.|||...||.||.|||||| |||| |.|| ||||
BPUM_0417___d 1344 GTATATTGTAAAAACGATTATCGACAAAGGGAT-----GGGAAATGTAGA 1388
BSNT_00765___ 1527 AGTTGATTCACATGCGGAGCAGGGGACAT--------CTTTTTCTATCGT 1568
|| |||||| ..||||..|| ||| |.||.||.||||.
BPUM_0417___d 1389 AG-----TCACAT--CAAGCATCGG-CATTGGTACCACCTTCTCAATCGA 1430
BSNT_00765___ 1569 TTTTCCAATGA----AG-GGGGAGGAAGCACAGCATGGCTCGTAA 1608
.||.||||||| || ||.||| || |||| |||.
BPUM_0417___d 1431 ATTCCCAATGATTATAGAGGAGAG--AG-ACAG-ATGA------- 1464
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.