Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00751 and BPUM_0413
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:31
# Commandline: needle
# -asequence dna-align/BSNT_00751___mntH.1.24716.seq
# -bsequence dna-align/BPUM_0413___mntH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00751___mntH-BPUM_0413___mntH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00751___mntH-BPUM_0413___mntH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00751___mntH
# 2: BPUM_0413___mntH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1310
# Identity: 948/1310 (72.4%)
# Similarity: 948/1310 (72.4%)
# Gaps: 67/1310 ( 5.1%)
# Score: 3260.5
#
#
#=======================================
BSNT_00751___ 1 ATG---AACAAGGACAT-----CACA-GCACA-ATCTCCCCGTTCCAAAG 40
||| |||||..|||| |||| ||||| ||.| ||.||
BPUM_0413___m 1 ATGACAAACAAATACATCGAGGCACAGGCACACATGT--------CAGAG 42
BSNT_00751___ 41 CCGTCCAAG-ATGCGCTTGACGGGAAAATCAGAGGATTCAGAGGGCTGCT 89
.|..|..|| .|||.|||||.||||||.|||.||||||.|||.|.||.||
BPUM_0413___m 43 GCAGCTGAGCGTGCACTTGAGGGGAAAGTCAAAGGATTTAGAAGACTCCT 92
BSNT_00751___ 90 CCCTTTTCTCGGCCCTGCATTTATAGCAGCCATTGCCTATATTGATCCCG 139
.|||||||||||||||||.|||||.|||||||||||.|||||||||||.|
BPUM_0413___m 93 TCCTTTTCTCGGCCCTGCTTTTATCGCAGCCATTGCTTATATTGATCCAG 142
BSNT_00751___ 140 GCAACTTCGCAACGAATATTTCGGCGGGTTCTAAATACGGATATATGCTC 189
|.||.||.||.||.||.|||.||||.||.||.|||||.|||||..|.||.
BPUM_0413___m 143 GAAATTTTGCCACCAACATTGCGGCTGGCTCCAAATATGGATACCTCCTT 192
BSNT_00751___ 190 TTATGGGTGA-TCTTATTTTCTAATATCATGGCCCTTT--TAATTCAATC 236
|||||||||| |||.| |.||.|||.|||||| |||| |.|||||.||
BPUM_0413___m 193 TTATGGGTGATTCTCA-TATCAAATCTCATGG--CTTTGCTCATTCAGTC 239
BSNT_00751___ 237 CCTATCCGCCAAACTCGGTATTGCGACAGGCAAAAATCTGCCTGAGGTTG 286
|.|||||||.||.|||||.||.||||||||.|||||..|.|||||..|.|
BPUM_0413___m 240 CTTATCCGCAAAGCTCGGAATCGCGACAGGTAAAAACTTACCTGAAATCG 289
BSNT_00751___ 287 CCCGTGAAGAATTCCCGAAGCCTGTCTCGATCGGATTATGGATTCAGGGC 336
|.||||||||.||.||.||.||.||.||||||||.|||||||||||.||.
BPUM_0413___m 290 CACGTGAAGAGTTTCCAAAACCCGTTTCGATCGGTTTATGGATTCAAGGA 339
BSNT_00751___ 337 GAGCTTGTCATTATCGCAACTGACCTGGCGGAATTTATCGGAGCGGCTCT 386
|||||.||||||||.||.||.||..|.||.||.||||||||.|||||.||
BPUM_0413___m 340 GAGCTCGTCATTATTGCCACGGATTTAGCTGAGTTTATCGGGGCGGCACT 389
BSNT_00751___ 387 GGGACTGTATTTGCTGTTCGGCATGCCGATGCTTGAAGCGTCTATTATTG 436
.||..|.||.|||||.||..|.||.|||.||||.|||||.||||||||.|
BPUM_0413___m 390 TGGTTTATACTTGCTCTTTCGAATCCCGCTGCTCGAAGCATCTATTATCG 439
BSNT_00751___ 437 CGGCGATCGGTTCTTTCGCGATATTGGAGCTTCAGCGCCGCGGTTATCGC 486
|.||.|||||.||.||.|||||||||||.||.||..|.||.||.|||||.
BPUM_0413___m 440 CAGCTATCGGCTCATTTGCGATATTGGAACTGCAAAGACGAGGATATCGA 489
BSNT_00751___ 487 TCACTTGAAGCCGGTATTGCCGGTATGCTGTTTGTGGTCGTGATCGCCTT 536
.|..|.|||||.||||||.|.||.||||||||.||.||||||||||| |
BPUM_0413___m 490 GCTTTAGAAGCAGGTATTACAGGCATGCTGTTCGTTGTCGTGATCGC--T 537
BSNT_00751___ 537 TGCGCTG--CAGACCTTTTTCGCAAAGCCTGATGCC----GTGTCAGTGA 580
|.||||| ||.||||||.||||.||.||.|||..| |||||..||
BPUM_0413___m 538 TTCGCTGTTCAAACCTTTGTCGCTAAACCCGATATCGCAAGTGTCGCTG- 586
BSNT_00751___ 581 TGAAG-GGCCTTTTTGTCCCGGCGTTTCATGGCACCGACAGTGTGCTTCT 629
| ||.||.||..|.||....|||.|||||.|.|||||||||||.||
BPUM_0413___m 587 ----GCGGACTGTTCATTCCAAAATTTGATGGCGCAGACAGTGTGCTGCT 632
BSNT_00751___ 630 TGCAGCGGGTATTCTTGGCGCAACTGTTATGCCGCACGCCATTTATTTAC 679
|||.||.||.|||.|.||.||.||.||.|||||.|||||.|||||.||||
BPUM_0413___m 633 TGCCGCTGGAATTTTAGGTGCGACCGTGATGCCTCACGCAATTTACTTAC 682
BSNT_00751___ 680 ACTCTGCCCTTACACAGCGGCGGGTGGTTGGCAAAACTGATGCAGAACGG 729
|.||.||..|.||.||..|..|.||.||.||||.|||.|| ||.||
BPUM_0413___m 683 ATTCAGCTTTAACCCAAAGAAGAGTCGTCGGCAGAACGGA-----AAAGG 727
BSNT_00751___ 730 AAAAAA-----ATCTTTAGGTTTGAATTTATTGATATTTTAATAGCGATG 774
|.|||| ||.||..|.|||||.|||.|.|||||..|.||.||.|||
BPUM_0413___m 728 AGAAAAAGCAGATTTTCCGCTTTGAGTTTTTAGATATCCTCATTGCAATG 777
BSNT_00751___ 775 CTGATTGCAGGGGCTATTAATGCAAGTATGCTGATTGTGGCTGCCGCATT 824
.|..|.||.||.||.||.|||||.||.|||.||||||||||||||||.||
BPUM_0413___m 778 ATCGTCGCCGGAGCCATCAATGCCAGCATGTTGATTGTGGCTGCCGCTTT 827
BSNT_00751___ 825 ATTCTTCAAAAACGGCCTGTTTGTTGAGGATCTCGACGTCGCATTTCAGC 874
|||.|..|||||.|||||.||||||||.|||.|.||.||.||.|||||||
BPUM_0413___m 828 ATTTTATAAAAATGGCCTTTTTGTTGAAGATTTAGATGTTGCGTTTCAGC 877
BSNT_00751___ 875 AATTCGG-ACATCTTGTCA-GTCCTATGTCTGCGGCTTTATTCGGGATCG 922
|.||.|| ||| ||.| || |.|||.|.||.||...||||||.||..|.|
BPUM_0413___m 878 ATTTTGGTACA-CTCG-CAGGACCTGTATCAGCCATTTTATTTGGTGTAG 925
BSNT_00751___ 923 GGCTGCTCGTTGCCGGTCTATCCAGTTCGTCTGTCGGTACACTTTCAGGC 972
|.|||||.||.|||||.||||||||.||.||||||||||||.|.||||||
BPUM_0413___m 926 GTCTGCTTGTAGCCGGACTATCCAGCTCTTCTGTCGGTACATTGTCAGGC 975
BSNT_00751___ 973 GACGTGATTATGCAAGGATTTA-TCAACTACCGCATTCCGCTGTATGTAC 1021
||..|.||||||||.||.|||| |||| |||||.||||||||.|||||.|
BPUM_0413___m 976 GATATCATTATGCAGGGCTTTATTCAA-TACCGAATTCCGCTTTATGTTC 1024
BSNT_00751___ 1022 GGCGTTTTATCACGATCATTCCGCCGATCTTGATCATCGCGTCAGGTGTT 1071
|.||..|.||.||.||||||||.||.||...|||.||.||.||.||.||.
BPUM_0413___m 1025 GCCGGCTGATTACCATCATTCCTCCTATTGCGATTATTGCATCTGGAGTG 1074
BSNT_00751___ 1072 AATCCGACGACCGCTCTCGTACTGAGCCAGGTCGTGCTGTCCTTCGGGAT 1121
||||||||..||||.||.||..||||.||||||||..|.||.||.|||||
BPUM_0413___m 1075 AATCCGACCTCCGCACTTGTGATGAGTCAGGTCGTCTTATCGTTTGGGAT 1124
BSNT_00751___ 1122 CGCCTTTGCCCTCATTCCGCTTATTATGTTTACAAGCAATAAACGGATCA 1171
.||||||||..|.||||||||.|||.|.||||||||.||.|||||.||.|
BPUM_0413___m 1125 TGCCTTTGCTTTAATTCCGCTCATTTTATTTACAAGTAAAAAACGAATTA 1174
BSNT_00751___ 1172 TGGGATCTCTG-ATCAAC----GCCAAATGGGTCACAGTGGTGTCTTGGC 1216
|||| || ||.||| |||...|||||.||||...|.||||||.
BPUM_0413___m 1175 TGGG-----TGAATTAACGAATGCCCGCTGGGTGACAGGAATATCTTGGG 1219
BSNT_00751___ 1217 TGATTGCTG-TATTGATCGTTGCTTTGAATGTGTTTTTAATTGTAGATAC 1265
||||.||.| |.||| |.||.||..|.|||.|.||.||||||||||||||
BPUM_0413___m 1220 TGATAGCAGCTCTTG-TTGTAGCACTTAATCTTTTCTTAATTGTAGATAC 1268
BSNT_00751___ 1266 GTTTCGATAA 1275
||||...|||
BPUM_0413___m 1269 GTTTATGTAA 1278
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