Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00715 and BPUM_0382
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:29
# Commandline: needle
# -asequence dna-align/BSNT_00715___kipI.1.24716.seq
# -bsequence dna-align/BPUM_0382___kipI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00715___kipI-BPUM_0382___kipI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00715___kipI-BPUM_0382___kipI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00715___kipI
# 2: BPUM_0382___kipI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 810
# Identity: 488/810 (60.2%)
# Similarity: 488/810 (60.2%)
# Gaps: 150/810 (18.5%)
# Score: 1319.0
#
#
#=======================================
BSNT_00715___ 1 ATGACTGT----------ACGATATCAAA--------------TCGAACA 26
|| |||||| ||| || |.|.
BPUM_0382___k 1 ------GTGGCATTTTCAACGATA--AAAGATTCTTTCACCTTTC-ACCC 41
BSNT_00715___ 27 GCTCGGTGATTCTGCAATGATGATCCG--ATTC-----GGA--------- 60
|||.||.|||.|.||.|| || |||| |||
BPUM_0382___k 42 GCTAGGAGATGCAGCGAT-------CGTAATTCAAGCAGGAACAGACATA 84
BSNT_00715___ 61 ---GAAGAAATCAATGAACAGGTCAACGGCATTGTCCACGCCGCGGCCG- 106
||||||||..||||.| ||.|||| ||.|..|
BPUM_0382___k 85 TGTGAAGAAATTCATGAGC---------GCGTTGT-------GCAGTTGT 118
BSNT_00715___ 107 ---CTTATATAGAAGAACAGCCATTTCCGGGATTCATTGAATGTATCCCG 153
|.|.|||.|||.||||.||||||...||||...|.|||..|.|.|..
BPUM_0382___k 119 TTTCATGTATTGAACAACATCCATTTGACGGATATGTGGAAGCTGTTCAA 168
BSNT_00715___ 154 GCTTTTACAAGTCTAACTGTATTTTATGATATGTATGAAGTGTA-CAA-- 200
||.|||||||...|.|||||.|||||.||...||||...||.|| |||
BPUM_0382___k 169 GCCTTTACAAACGTGACTGTTTTTTACGAGCCGTATACCGTTTATCAATC 218
BSNT_00715___ 201 -GCATTTGCCT-------CAAGGCATAAGCTCACCTTTTGAGAAGGTCAA 242
||.|.| || ||||.|.|| ||.||||.|||...|||.||
BPUM_0382___k 219 GGCGTCT--CTTCAACAACAAGACTTA---TCCCCTTATGAATGGGTGAA 263
BSNT_00715___ 243 GTGCGATGTCGAAGAGCGCCTGG--CAGAAATAGC-CGAAGACTATGAGG 289
..||.||.|.|||...|.|||.| .||||||.|| .||||....|.|||
BPUM_0382___k 264 AAGCTATATTGAAACACTCCTTGAAAAGAAATGGCAGGAAGGGATTCAGG 313
BSNT_00715___ 290 TCAACCGCCGTATTGTAGAAATTCCTGTCTGCTATGGCGGTGAATTTGGT 339
..||.|||||.|...|.||.||.||.|||||.||.||.||.||.||.||.
BPUM_0382___k 314 GGAAGCGCCGCACCATCGACATACCGGTCTGTTACGGAGGAGAGTTGGGC 363
BSNT_00715___ 340 CCGGATTTAGAAGAGGTGGCGAAGATCAATCAGCTGT----CACCGGAGG 385
||.|||||||||||.||.||...||||||| ||| ||||.||||
BPUM_0382___k 364 CCTGATTTAGAAGAAGTCGCCCGGATCAAT----TGTTTAACACCAGAGG 409
BSNT_00715___ 386 AAGTAAT-CGACATTCATAC-----AAACGGTGAATATGTGGTGTATATG 429
||||..| || .|||||||| ..||| |||.|.||.||||||
BPUM_0382___k 410 AAGTCGTGCG-TATTCATACCTCAGGGACG-----TATCTTGTCTATATG 453
BSNT_00715___ 430 CTTGGCTTCGCGCCCGGTTTTCCTTTTCTAGGCGGGATGTC--AAAACGC 477
.||||.||.||.||.||.|||||.|||.||||||||.|||| |||| .
BPUM_0382___k 454 ATTGGATTTGCCCCAGGCTTTCCGTTTTTAGGCGGGCTGTCTGAAAA--G 501
BSNT_00715___ 478 ATTGCAGCTCCG---AGAAAATCATCGCCAAGACCGTCGATTCCCGCAGG 524
||.|||||.||| |||.||.|| ||.|||..|||.|||||...|||
BPUM_0382___k 502 ATCGCAGCCCCGCGCAGAGAAACA---CCGAGAATGTCCATTCCAAAAGG 548
BSNT_00715___ 525 TTCGGTCGGTATTGCGGGATTGCAGACAGGCGTTTACCCGATTTCAACGC 574
.||.|||||.|||||||||..||||||.|||||||||||||||||.||.|
BPUM_0382___k 549 ATCTGTCGGCATTGCGGGAAAGCAGACCGGCGTTTACCCGATTTCCACAC 598
BSNT_00715___ 575 CGGGCGGCTGGCAGCTGATCGGCAAAACGCCGCTGGCTCTTTTCCGGCCG 624
|.||.|||||||||||.||.||..||||.||||||.|.||.||.||.||.
BPUM_0382___k 599 CTGGTGGCTGGCAGCTCATTGGACAAACTCCGCTGCCACTCTTTCGTCCA 648
BSNT_00715___ 625 CAGGAAAA---CCC--GCCGACATTGCTGCGGGCGGGAGATACTGTGAAA 669
.|.||||| ||| |.| |.|||.|.||.|||||....||.|.|
BPUM_0382___k 649 GACGAAAAAATCCCAAGTC-----TACTGAGAGCAGGAGACGAGGTCAGA 693
BSNT_00715___ 670 TTCGTTCGCATCTCAGAAAAAGA--CTATCACGCCTAT-AAGGAGG-AGT 715
||.||.|..||.||.|||.|.|| .|.||| || || ||||||| ||
BPUM_0382___k 694 TTTGTCCAAATGTCTGAAGAGGAATTTTTCA-GC--ATGAAGGAGGCAG- 739
BSNT_00715___ 716 CCAA--TTGA 723
|| ||||
BPUM_0382___k 740 --AACGTTGA 747
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