Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00699 and BPUM_0370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:28
# Commandline: needle
# -asequence dna-align/BSNT_00699.1.24716.seq
# -bsequence dna-align/BPUM_0370.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00699-BPUM_0370.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00699-BPUM_0370.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00699
# 2: BPUM_0370
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 322/451 (71.4%)
# Similarity: 322/451 (71.4%)
# Gaps: 35/451 ( 7.8%)
# Score: 1074.0
#
#
#=======================================
BSNT_00699 1 ATG---CAAGTACTCGCAAAGGAAAACAT-----TAAAC--TCAATCAAA 40
||| ||||||||..||||.||.||.|| ||||| .|||.||
BPUM_0370 1 ATGAAACAAGTACTTTCAAAAGACAATATTTTTCTAAACGAACAAGCA-- 48
BSNT_00699 41 CGGTATCATCAAAAGAAGAGGCTATCAAATTGGCAGGCCAGACG-CTGAT 89
|| |||.||||||||.||.||||||...|||||| ||.| ||.|.
BPUM_0370 49 -GG----ATCGAAAGAAGAAGCCATCAAAAAAGCAGGC--GAAGTCTTAG 91
BSNT_00699 90 TGAC-AACGGCTACGTGACAGAG-GATTACATTAGCAAAATGTTTGAACG 137
||.| ||.|||||.||.||| || |||||..||..|||||||||||||.|
BPUM_0370 92 TGGCAAATGGCTATGTCACA-AGTGATTATGTTGACAAAATGTTTGAAAG 140
BSNT_00699 138 TGAAGAAACGTCTTCTACGTTTATGGGGAATTTCATTGCCATTCCACACG 187
.|||.|.|..||.|||||.||||||||.|||...|||||.||.||.||.|
BPUM_0370 141 AGAAAATATCTCATCTACATTTATGGGCAATGGGATTGCGATACCTCATG 190
BSNT_00699 188 GCACAGAAGAAGCGAAAAGCGAG--GTGCTTCACTCAGGAATTTCAATCA 235
|.|||||.||.|| |||||| || ||.|||||.||.||.|||||.||||
BPUM_0370 191 GAACAGAGGATGC-AAAAGC-AGCTGTCCTTCATTCTGGGATTTCCATCA 238
BSNT_00699 236 TACAGATTCCAGAGGGCGTTGAGTACGGAGAAGGCAACACGGCAAAAGTG 285
|.||.||||||||.||.|||||.|||||.|||||.||.|..||.|||||.
BPUM_0370 239 TTCAAATTCCAGATGGTGTTGAATACGGCGAAGGAAATATCGCCAAAGTC 288
BSNT_00699 286 GTATTCGGCATTGCGGGTAAAAATAATGAGCATTTAGACATTTTGTCTAA 335
||.||.|||||.||.||||||||.||.||.|||.|.||.|||.|.|||.|
BPUM_0370 289 GTTTTTGGCATCGCTGGTAAAAACAACGAACATCTCGATATTCTTTCTCA 338
BSNT_00699 336 CATCGCCATTATCTGTTCAGAAGAAGAAAACATTGAACGCCTGATCTCCG 385
.||.||.|||.|||||||||||||.|||||..|.||||||.|.|||...|
BPUM_0370 339 AATTGCGATTGTCTGTTCAGAAGAGGAAAATGTAGAACGCATTATCCATG 388
BSNT_00699 386 CTAAAAGCG----AAGAAGATTTGATCGCCATTTTCAACGAGGTGAACTG 431
|.|| | |.||.||..||||||||||.||.|||||||||||||.
BPUM_0370 389 CCAA----GGATCAGGATGAACTGATCGCCATCTTTAACGAGGTGAACTA 434
BSNT_00699 432 A 432
|
BPUM_0370 435 A 435
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