Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_00698 and BPUM_0369

See Amino acid alignment / Visit BSNT_00698 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:28
# Commandline: needle
#    -asequence dna-align/BSNT_00698.1.24716.seq
#    -bsequence dna-align/BPUM_0369___mtlA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00698-BPUM_0369___mtlA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00698-BPUM_0369___mtlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00698
# 2: BPUM_0369___mtlA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1480
# Identity:    1046/1480 (70.7%)
# Similarity:  1046/1480 (70.7%)
# Gaps:          80/1480 ( 5.4%)
# Score: 3565.0
# 
#
#=======================================

BSNT_00698         1 ATGCAGCAGCAAGAACAGCAGCAAGGCGGCATGAAAGTGAAAGTGCAGCG     50
                     ||||||      |||      .||.||||..|....||.|||||.|||||
BPUM_0369___m      1 ATGCAG------GAA------AAAAGCGGATTTCGCGTAAAAGTACAGCG     38

BSNT_00698        51 CTTTGGGAGTTATTTGAGCGGAATGATCATGCCGAATATCGGCGCGTTTA    100
                     ||||||.||.|||||.|||||.|||||.|||||||||||.||.||.||||
BPUM_0369___m     39 CTTTGGAAGCTATTTAAGCGGCATGATTATGCCGAATATTGGAGCATTTA     88

BSNT_00698       101 TCGCGTGGGGTATCATTACCGCGCTGTTTATTCCGGCAGGATGG----TT    146
                     ||||.|||||..|||||||.||.||||||||||||  ||  |||    ||
BPUM_0369___m     89 TCGCTTGGGGACTCATTACGGCACTGTTTATTCCG--AG--TGGCTATTT    134

BSNT_00698       147 TCCGAATGAACAGCTGAAC-ACGCTGGTCAGCCCGATGATTACGTATTTA    195
                     .||.||||||||| |.|.| ||.||.||..||||.|||||.|..||.|||
BPUM_0369___m    135 GCCAAATGAACAG-TTAGCTACACTTGTGGGCCCAATGATCAACTACTTA    183

BSNT_00698       196 TTGCCGCTTTTGATAGCGTATACAGGCGGAAAAATGATCTACGACCACCG    245
                     .|||||||.||.||.|..||.||||||||.|||.|..|.||||||||.||
BPUM_0369___m    184 CTGCCGCTCTTAATCGGTTACACAGGCGGTAAACTCGTATACGACCATCG    233

BSNT_00698       246 CGGCGGAGTTGTCGGAGCGACAGCGGCAATTGGGGTGATTGTCGGATCGG    295
                     .|||||.||..||||.||.||.||..|.||||||||.||||||||.||.|
BPUM_0369___m    234 AGGCGGGGTACTCGGTGCAACCGCAACGATTGGGGTCATTGTCGGGTCAG    283

BSNT_00698       296 ATATTCCAATGTTTTTAGGCGCAATGATTATGGGTCCGCTTGGCGGATAC    345
                     |||||||.|||||||||||.||.|||||.|||||.||.||||||||.|||
BPUM_0369___m    284 ATATTCCGATGTTTTTAGGTGCCATGATCATGGGACCACTTGGCGGTTAC    333

BSNT_00698       346 CTCATTAAACAGACTGATAAATTATTCAAGGATAAAGTCAAGCAAGGCTT    395
                     .|.|||||..|.|.||||.|..|.|||||.|||..|.||||....|||||
BPUM_0369___m    334 TTGATTAAGAAAATTGATCAGCTCTTCAAAGATCGAATCAAATCGGGCTT    383

BSNT_00698       396 TGAAATGCTGATCAACAACTTTACGGCAGGGATTGTCGGCGC--GGCTT-    442
                     |||.|||||..|.||.||.|||||||||||||||.|.||.||  ..||| 
BPUM_0369___m    384 TGAGATGCTTGTGAATAATTTTACGGCAGGGATTCTAGGTGCCATTCTTG    433

BSNT_00698       443 TAACGATTCTCGCGTTTTACGCTATCGGCCCGGTTGTCCTGACGCTAAAT    492
                     |..|||||   ||.||.||.||||||||.||.|||||.||....||||||
BPUM_0369___m    434 TCGCGATT---GCCTTCTATGCTATCGGACCAGTTGTACTTGGTCTAAAT    480

BSNT_00698       493 AAATTGCTGGCGGCTGGTGTGGAAGTCATTGTACACGCTAATTTACTGCC    542
                     |||...||.|||||.|||||.||..|||||||..|.||..||||.||.||
BPUM_0369___m    481 AAAGCCCTTGCGGCAGGTGTAGATATCATTGTGAATGCACATTTGCTTCC    530

BSNT_00698       543 GGTAGCCAGTGTTTTTGTAGAGCCGGCGAAAGTGTTGTTCCTTAACAACG    592
                     |.|.||.|||.||||..|.||.||.||.|||||.||||||.|.|||||.|
BPUM_0369___m    531 GCTGGCAAGTATTTTCATTGAACCAGCAAAAGTCTTGTTCTTAAACAATG    580

BSNT_00698       593 CCATAAACCACGGAATCTTAAGCCCGATCGGAATCGAGCAAGCATCCCAA    642
                     |.||.|||||.|||||||||.|.|||.|.||..|.||||||||..|..|.
BPUM_0369___m    581 CGATTAACCAAGGAATCTTAGGTCCGTTAGGGGTAGAGCAAGCGGCGAAG    630

BSNT_00698       643 ACAGGAAAATCAATTCTGTTTTTAGTAGAAGCAAACCCTGGACCGGGGCT    692
                     |||||..|.||..|||||||.||..|.|||.|||||||.|||||.||..|
BPUM_0369___m    631 ACAGGGCAGTCTGTTCTGTTCTTGCTTGAAACAAACCCAGGACCAGGTTT    680

BSNT_00698       693 CGGCATTTTGCTGGCGTACATGTTCTTTGGCAAAGGATCTTCAAAATCAA    742
                     .||..|.||.||.||.|||||||||||.||.|.|||      .||..|||
BPUM_0369___m    681 AGGTGTCTTACTTGCATACATGTTCTTCGGAAGAGG------GAACGCAA    724

BSNT_00698       743 ------CGGCTCCCGGTGCGGCGATCATCCATTTCTTCGGCGGGATTCAC    786
                           |.||.||.||||||....||||.||.||.||.|||||.|||||.
BPUM_0369___m    725 AGCAGTCTGCACCGGGTGCGATTGTCATTCAATTTTTAGGCGGTATTCAT    774

BSNT_00698       787 GAGATTTACTTCCCGTACATTCTGATGAAACCGGCCCTGATTCTTGCAGC    836
                     ||||||||||||||||||||..|.||||||||....||.|||.|.||.|.
BPUM_0369___m    775 GAGATTTACTTCCCGTACATCTTAATGAAACCAAAGCTTATTTTAGCGGT    824

BSNT_00698       837 CATTGCCGGCGGAGCAAGCGGACTCTTAACGTTTACGATCTTTAATGCCG    886
                     ||||||.||.|||||.|||||..|..|.||.|||||..|.||.|||||.|
BPUM_0369___m    825 CATTGCAGGGGGAGCGAGCGGCGTTCTGACCTTTACCCTGTTAAATGCAG    874

BSNT_00698       887 GACT-------TGTCGCGGCAGCGTCACCGGGAAGCATTATCGCATTGAT    929
                     | ||       |||    ||  |||||||.|||||.||||||||..|.||
BPUM_0369___m    875 G-CTTAAAGGCTGT----GC--CGTCACCAGGAAGTATTATCGCTCTTAT    917

BSNT_00698       930 GGCAATGACGCCAAGAGGAGGCTATTTCGGCGTATTGGCGGGTGTATTGG    979
                     |...|||.|.||||.|||.||..||.|.|..||..|.||.|||||..|.|
BPUM_0369___m    918 GCTCATGTCACCAAAAGGCGGACATCTTGCTGTTCTAGCAGGTGTCGTCG    967

BSNT_00698       980 TCGCTGCAGCTGTATCGTTCATCGTTTCAGCAGTGATCCTGAAATCCTCT   1029
                     |.||..|.|..||.||.|||.|.||..|..|.||.||..|.|||.|||||
BPUM_0369___m    968 TGGCAACCGTCGTCTCTTTCCTTGTCGCTTCTGTAATTTTAAAAGCCTCT   1017

BSNT_00698      1030 AAAGCTAG-TGAAGAAGACCTGGCTGCCGCAACAGAAAAAATGCAGTCCA   1078
                     ||||| || |||.||.||..|..|.||.||||||||||||||||||..||
BPUM_0369___m   1018 AAAGC-AGTTGACGAGGATTTAACAGCAGCAACAGAAAAAATGCAGGACA   1066

BSNT_00698      1079 TGAAGGGGAAGAAAAGCCAAGCAGCAGCTGCT-TTAGAG-----------   1116
                     ||||.|||||||||||...||||||||||||| |||.||           
BPUM_0369___m   1067 TGAAAGGGAAGAAAAGTGCAGCAGCAGCTGCTCTTACAGCTCAAAAAGAA   1116

BSNT_00698      1117 ---GCGGAACAAGCCAAAGCAGAAGAAGCGTC------TGAGCTGTCTCC   1157
                        ||.|   ||||.||.|.|.|||.|||.||      |||..||..|||
BPUM_0369___m   1117 GGTGCTG---AAGCAAACGAACAAGCAGCATCTCCAAGTGATGTGATTCC   1163

BSNT_00698      1158 TGAAAGCGTGAACAAAATTATCTTTGCGTGTGATGCGGGAATGGGATCAA   1207
                     .||...||||||||||||.||||||||.||.|||||.||||||||.||||
BPUM_0369___m   1164 AGATGACGTGAACAAAATCATCTTTGCCTGCGATGCAGGAATGGGCTCAA   1213

BSNT_00698      1208 GTGCCATGGGGGCATCCATCTTAAGAAACAAAGTGAAAAAAGCGGAGCTT   1257
                     ||||.|||||.||||||||.||||..||.|||||.|||||.||.||||||
BPUM_0369___m   1214 GTGCGATGGGCGCATCCATTTTAAAGAATAAAGTCAAAAAGGCAGAGCTT   1263

BSNT_00698      1258 GACATCAGTGTGACCAACACGGCCATTAACAATCTGCCAAGCGATGCGGA   1307
                     ||.||...||||||.|||||..||||.|.|||..|.||.|..||.||.||
BPUM_0369___m   1264 GATATTGATGTGACAAACACATCCATCAGCAACATTCCGAATGACGCTGA   1313

BSNT_00698      1308 TATTGTCATCACCCACAAAGATTTAACAGACCGCGCGAAAGCAAAGCTGC   1357
                     |.|.|||.|.||.||.|||||||||||||||.|.|||||.||.||..|||
BPUM_0369___m   1314 TGTGGTCTTTACTCATAAAGATTTAACAGACAGAGCGAAGGCGAAATTGC   1363

BSNT_00698      1358 CGAACGCGACGCACATATCAGTGGATAACTTCTTAAACAGCCCGAAATAC   1407
                     |...|||...|||.||.|||||.|||||.|||||||||||.|||||||||
BPUM_0369___m   1364 CAGGCGCTGTGCATATCTCAGTAGATAATTTCTTAAACAGTCCGAAATAC   1413

BSNT_00698      1408 GACGAGCTGATTGAAAAGCTGAAAAAGTAA   1437
                     ||.|||||||||||.||..|||||||.|||
BPUM_0369___m   1414 GATGAGCTGATTGAGAAATTGAAAAAATAA   1443


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.