Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00698 and BPUM_0369
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:28
# Commandline: needle
# -asequence dna-align/BSNT_00698.1.24716.seq
# -bsequence dna-align/BPUM_0369___mtlA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00698-BPUM_0369___mtlA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00698-BPUM_0369___mtlA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00698
# 2: BPUM_0369___mtlA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1480
# Identity: 1046/1480 (70.7%)
# Similarity: 1046/1480 (70.7%)
# Gaps: 80/1480 ( 5.4%)
# Score: 3565.0
#
#
#=======================================
BSNT_00698 1 ATGCAGCAGCAAGAACAGCAGCAAGGCGGCATGAAAGTGAAAGTGCAGCG 50
|||||| ||| .||.||||..|....||.|||||.|||||
BPUM_0369___m 1 ATGCAG------GAA------AAAAGCGGATTTCGCGTAAAAGTACAGCG 38
BSNT_00698 51 CTTTGGGAGTTATTTGAGCGGAATGATCATGCCGAATATCGGCGCGTTTA 100
||||||.||.|||||.|||||.|||||.|||||||||||.||.||.||||
BPUM_0369___m 39 CTTTGGAAGCTATTTAAGCGGCATGATTATGCCGAATATTGGAGCATTTA 88
BSNT_00698 101 TCGCGTGGGGTATCATTACCGCGCTGTTTATTCCGGCAGGATGG----TT 146
||||.|||||..|||||||.||.|||||||||||| || ||| ||
BPUM_0369___m 89 TCGCTTGGGGACTCATTACGGCACTGTTTATTCCG--AG--TGGCTATTT 134
BSNT_00698 147 TCCGAATGAACAGCTGAAC-ACGCTGGTCAGCCCGATGATTACGTATTTA 195
.||.||||||||| |.|.| ||.||.||..||||.|||||.|..||.|||
BPUM_0369___m 135 GCCAAATGAACAG-TTAGCTACACTTGTGGGCCCAATGATCAACTACTTA 183
BSNT_00698 196 TTGCCGCTTTTGATAGCGTATACAGGCGGAAAAATGATCTACGACCACCG 245
.|||||||.||.||.|..||.||||||||.|||.|..|.||||||||.||
BPUM_0369___m 184 CTGCCGCTCTTAATCGGTTACACAGGCGGTAAACTCGTATACGACCATCG 233
BSNT_00698 246 CGGCGGAGTTGTCGGAGCGACAGCGGCAATTGGGGTGATTGTCGGATCGG 295
.|||||.||..||||.||.||.||..|.||||||||.||||||||.||.|
BPUM_0369___m 234 AGGCGGGGTACTCGGTGCAACCGCAACGATTGGGGTCATTGTCGGGTCAG 283
BSNT_00698 296 ATATTCCAATGTTTTTAGGCGCAATGATTATGGGTCCGCTTGGCGGATAC 345
|||||||.|||||||||||.||.|||||.|||||.||.||||||||.|||
BPUM_0369___m 284 ATATTCCGATGTTTTTAGGTGCCATGATCATGGGACCACTTGGCGGTTAC 333
BSNT_00698 346 CTCATTAAACAGACTGATAAATTATTCAAGGATAAAGTCAAGCAAGGCTT 395
.|.|||||..|.|.||||.|..|.|||||.|||..|.||||....|||||
BPUM_0369___m 334 TTGATTAAGAAAATTGATCAGCTCTTCAAAGATCGAATCAAATCGGGCTT 383
BSNT_00698 396 TGAAATGCTGATCAACAACTTTACGGCAGGGATTGTCGGCGC--GGCTT- 442
|||.|||||..|.||.||.|||||||||||||||.|.||.|| ..|||
BPUM_0369___m 384 TGAGATGCTTGTGAATAATTTTACGGCAGGGATTCTAGGTGCCATTCTTG 433
BSNT_00698 443 TAACGATTCTCGCGTTTTACGCTATCGGCCCGGTTGTCCTGACGCTAAAT 492
|..||||| ||.||.||.||||||||.||.|||||.||....||||||
BPUM_0369___m 434 TCGCGATT---GCCTTCTATGCTATCGGACCAGTTGTACTTGGTCTAAAT 480
BSNT_00698 493 AAATTGCTGGCGGCTGGTGTGGAAGTCATTGTACACGCTAATTTACTGCC 542
|||...||.|||||.|||||.||..|||||||..|.||..||||.||.||
BPUM_0369___m 481 AAAGCCCTTGCGGCAGGTGTAGATATCATTGTGAATGCACATTTGCTTCC 530
BSNT_00698 543 GGTAGCCAGTGTTTTTGTAGAGCCGGCGAAAGTGTTGTTCCTTAACAACG 592
|.|.||.|||.||||..|.||.||.||.|||||.||||||.|.|||||.|
BPUM_0369___m 531 GCTGGCAAGTATTTTCATTGAACCAGCAAAAGTCTTGTTCTTAAACAATG 580
BSNT_00698 593 CCATAAACCACGGAATCTTAAGCCCGATCGGAATCGAGCAAGCATCCCAA 642
|.||.|||||.|||||||||.|.|||.|.||..|.||||||||..|..|.
BPUM_0369___m 581 CGATTAACCAAGGAATCTTAGGTCCGTTAGGGGTAGAGCAAGCGGCGAAG 630
BSNT_00698 643 ACAGGAAAATCAATTCTGTTTTTAGTAGAAGCAAACCCTGGACCGGGGCT 692
|||||..|.||..|||||||.||..|.|||.|||||||.|||||.||..|
BPUM_0369___m 631 ACAGGGCAGTCTGTTCTGTTCTTGCTTGAAACAAACCCAGGACCAGGTTT 680
BSNT_00698 693 CGGCATTTTGCTGGCGTACATGTTCTTTGGCAAAGGATCTTCAAAATCAA 742
.||..|.||.||.||.|||||||||||.||.|.||| .||..|||
BPUM_0369___m 681 AGGTGTCTTACTTGCATACATGTTCTTCGGAAGAGG------GAACGCAA 724
BSNT_00698 743 ------CGGCTCCCGGTGCGGCGATCATCCATTTCTTCGGCGGGATTCAC 786
|.||.||.||||||....||||.||.||.||.|||||.|||||.
BPUM_0369___m 725 AGCAGTCTGCACCGGGTGCGATTGTCATTCAATTTTTAGGCGGTATTCAT 774
BSNT_00698 787 GAGATTTACTTCCCGTACATTCTGATGAAACCGGCCCTGATTCTTGCAGC 836
||||||||||||||||||||..|.||||||||....||.|||.|.||.|.
BPUM_0369___m 775 GAGATTTACTTCCCGTACATCTTAATGAAACCAAAGCTTATTTTAGCGGT 824
BSNT_00698 837 CATTGCCGGCGGAGCAAGCGGACTCTTAACGTTTACGATCTTTAATGCCG 886
||||||.||.|||||.|||||..|..|.||.|||||..|.||.|||||.|
BPUM_0369___m 825 CATTGCAGGGGGAGCGAGCGGCGTTCTGACCTTTACCCTGTTAAATGCAG 874
BSNT_00698 887 GACT-------TGTCGCGGCAGCGTCACCGGGAAGCATTATCGCATTGAT 929
| || ||| || |||||||.|||||.||||||||..|.||
BPUM_0369___m 875 G-CTTAAAGGCTGT----GC--CGTCACCAGGAAGTATTATCGCTCTTAT 917
BSNT_00698 930 GGCAATGACGCCAAGAGGAGGCTATTTCGGCGTATTGGCGGGTGTATTGG 979
|...|||.|.||||.|||.||..||.|.|..||..|.||.|||||..|.|
BPUM_0369___m 918 GCTCATGTCACCAAAAGGCGGACATCTTGCTGTTCTAGCAGGTGTCGTCG 967
BSNT_00698 980 TCGCTGCAGCTGTATCGTTCATCGTTTCAGCAGTGATCCTGAAATCCTCT 1029
|.||..|.|..||.||.|||.|.||..|..|.||.||..|.|||.|||||
BPUM_0369___m 968 TGGCAACCGTCGTCTCTTTCCTTGTCGCTTCTGTAATTTTAAAAGCCTCT 1017
BSNT_00698 1030 AAAGCTAG-TGAAGAAGACCTGGCTGCCGCAACAGAAAAAATGCAGTCCA 1078
||||| || |||.||.||..|..|.||.||||||||||||||||||..||
BPUM_0369___m 1018 AAAGC-AGTTGACGAGGATTTAACAGCAGCAACAGAAAAAATGCAGGACA 1066
BSNT_00698 1079 TGAAGGGGAAGAAAAGCCAAGCAGCAGCTGCT-TTAGAG----------- 1116
||||.|||||||||||...||||||||||||| |||.||
BPUM_0369___m 1067 TGAAAGGGAAGAAAAGTGCAGCAGCAGCTGCTCTTACAGCTCAAAAAGAA 1116
BSNT_00698 1117 ---GCGGAACAAGCCAAAGCAGAAGAAGCGTC------TGAGCTGTCTCC 1157
||.| ||||.||.|.|.|||.|||.|| |||..||..|||
BPUM_0369___m 1117 GGTGCTG---AAGCAAACGAACAAGCAGCATCTCCAAGTGATGTGATTCC 1163
BSNT_00698 1158 TGAAAGCGTGAACAAAATTATCTTTGCGTGTGATGCGGGAATGGGATCAA 1207
.||...||||||||||||.||||||||.||.|||||.||||||||.||||
BPUM_0369___m 1164 AGATGACGTGAACAAAATCATCTTTGCCTGCGATGCAGGAATGGGCTCAA 1213
BSNT_00698 1208 GTGCCATGGGGGCATCCATCTTAAGAAACAAAGTGAAAAAAGCGGAGCTT 1257
||||.|||||.||||||||.||||..||.|||||.|||||.||.||||||
BPUM_0369___m 1214 GTGCGATGGGCGCATCCATTTTAAAGAATAAAGTCAAAAAGGCAGAGCTT 1263
BSNT_00698 1258 GACATCAGTGTGACCAACACGGCCATTAACAATCTGCCAAGCGATGCGGA 1307
||.||...||||||.|||||..||||.|.|||..|.||.|..||.||.||
BPUM_0369___m 1264 GATATTGATGTGACAAACACATCCATCAGCAACATTCCGAATGACGCTGA 1313
BSNT_00698 1308 TATTGTCATCACCCACAAAGATTTAACAGACCGCGCGAAAGCAAAGCTGC 1357
|.|.|||.|.||.||.|||||||||||||||.|.|||||.||.||..|||
BPUM_0369___m 1314 TGTGGTCTTTACTCATAAAGATTTAACAGACAGAGCGAAGGCGAAATTGC 1363
BSNT_00698 1358 CGAACGCGACGCACATATCAGTGGATAACTTCTTAAACAGCCCGAAATAC 1407
|...|||...|||.||.|||||.|||||.|||||||||||.|||||||||
BPUM_0369___m 1364 CAGGCGCTGTGCATATCTCAGTAGATAATTTCTTAAACAGTCCGAAATAC 1413
BSNT_00698 1408 GACGAGCTGATTGAAAAGCTGAAAAAGTAA 1437
||.|||||||||||.||..|||||||.|||
BPUM_0369___m 1414 GATGAGCTGATTGAGAAATTGAAAAAATAA 1443
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