Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00686 and BPUM_0362

See Amino acid alignment / Visit BSNT_00686 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:28
# Commandline: needle
#    -asequence dna-align/BSNT_00686___gabT.1.24716.seq
#    -bsequence dna-align/BPUM_0362___gabT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00686___gabT-BPUM_0362___gabT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00686___gabT-BPUM_0362___gabT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00686___gabT
# 2: BPUM_0362___gabT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1340
# Identity:     986/1340 (73.6%)
# Similarity:   986/1340 (73.6%)
# Gaps:          52/1340 ( 3.9%)
# Score: 3411.5
# 
#
#=======================================

BSNT_00686___      1 ATGAGTCAAACAACAGTAA---GCATAACAACTGCACAATGGCAGCAAAA     47
                     |||||||||||.|||..||   |..|..||||||...||||||||...||
BPUM_0362___g      1 ATGAGTCAAACGACAACAAACCGTTTTTCAACTGAGGAATGGCAGGGGAA     50

BSNT_00686___     48 ACGGGATCAATTTGTGTCAAAAGGTGTGAGCAACGGCAACCG-CAGTCTG     96
                     |.|.|||||||..||..|||.|||.|||||.||.|||||||| || |||.
BPUM_0362___g     51 AAGAGATCAATACGTCGCAAGAGGCGTGAGTAATGGCAACCGTCA-TCTT     99

BSNT_00686___     97 GCGGTCAAAGGAGAAGGG-GCCGAGCTGTACGATCTGGATGGCCGGA---    142
                     ||.| ||||||.|||||| ||||||||.|.||||.|.||||   |||   
BPUM_0362___g    100 GCAG-CAAAGGGGAAGGGTGCCGAGCTATTCGATATCGATG---GGAAAC    145

BSNT_00686___    143 GATTTATTGATTTTGCAGGCGCCATCGGCACGTTAAATGTCGGACACTCG    192
                     |.|||||.||||||||.|||||.||.||.|||||||||||.|||||.||.
BPUM_0362___g    146 GTTTTATCGATTTTGCTGGCGCGATTGGTACGTTAAATGTAGGACATTCA    195

BSNT_00686___    193 CATCCGAAGGTGGTTGAGGCTGT-GAAGCGGCAGGCGGAGGAG-CTGATT    240
                     |||||.|||||.||.||.||||| .|||| .|||||.|| .|| ||||||
BPUM_0362___g    196 CATCCAAAGGTTGTGGAAGCTGTCAAAGC-ACAGGCAGA-CAGTCTGATT    243

BSNT_00686___    241 CATCCTGGTTTTAATGTCATGATGTACCCGA--CTTATATCGAGTTAGCC    288
                     ||.||.||.||.||.||.||||||||  |||  |.||||||||.||.||.
BPUM_0362___g    244 CACCCAGGCTTCAACGTGATGATGTA--CGAATCGTATATCGAATTGGCA    291

BSNT_00686___    289 GAAAAACTGTGTGGCATTGCACCGGGCAGCCATGAGAAAAAAGCGATTTT    338
                     ||.||.||.|||..|.|..||||.||...||||||.||||||||.|||||
BPUM_0362___g    292 GAGAAGCTATGTCACCTCACACCAGGTGACCATGACAAAAAAGCCATTTT    341

BSNT_00686___    339 TCTTAACTCAGGGGCGGAAGCAGTCGAAAACGCTGTGAAAATCGCCAGAA    388
                     .|||||.|||||.||.|||||.||.||.||.||.||||||||.||..|.|
BPUM_0362___g    342 CCTTAATTCAGGTGCAGAAGCTGTTGAGAATGCGGTGAAAATTGCACGTA    391

BSNT_00686___    389 GGTATACAAAGCGCCAAGGCGTTGTCTCGTTTACACGCGGGTTTCACGGG    438
                     ..|||||.||..|.||.|.||||||.|||||||||.|.||.||.|||||.
BPUM_0362___g    392 AATATACGAAAAGGCAGGCCGTTGTGTCGTTTACAAGAGGCTTCCACGGC    441

BSNT_00686___    439 CGCACGAATATGACGATGAGCATGACAAGCAAGGTAAAACCTTATAAATT    488
                     .|.|||||||||||||||||||||||.||.|||||.||.||.||.|||||
BPUM_0362___g    442 AGAACGAATATGACGATGAGCATGACGAGTAAGGTCAAGCCATACAAATT    491

BSNT_00686___    489 CGGTTTCGGACCTTTTGCGCCAGAGGTTTATCAAGCGCCGTTCCCTTATT    538
                     .||.||||||||.||||||.|||||||.|||||||||||.|.|||.||||
BPUM_0362___g    492 TGGGTTCGGACCATTTGCGTCAGAGGTGTATCAAGCGCCATACCCATATT    541

BSNT_00686___    539 ATTATCAGAAGCCGGCCGGCATGAGTGATGAAAGCTATGACGA-TATGGT    587
                     |.|||||||||||.|..||..|.||.||||.|..|||.||.|| || ..|
BPUM_0362___g    542 ACTATCAGAAGCCAGAAGGATTAAGCGATGCAGCCTACGATGAGTA-CAT    590

BSNT_00686___    588 CATTCAAGCATTCAATGATTTCTTTATCGCTTCAGTGGCGCCTGAAACGG    637
                     ||||.|...|||||||.|.||.||..|||||.|.||.||.||.|||||.|
BPUM_0362___g    591 CATTGATCAATTCAATCAATTTTTCGTCGCTACTGTTGCACCAGAAACTG    640

BSNT_00686___    638 TGGCGTGTGTCGTGATGGAGCCAGTGCAGGGAGAAGGCGGATTTATTATT    687
                     |.||||||||.||.|||||||||||.||.||.||.||||||||.|||.|.
BPUM_0362___g    641 TTGCGTGTGTGGTCATGGAGCCAGTCCAAGGGGAGGGCGGATTCATTGTA    690

BSNT_00686___    688 CCTTCGAAACGGTTCGTACAGCACGTCGCTTCATTCTGCAAAGAACACGG    737
                     ||.|||||.||.||.||.|||||.||.|||||||||||..|..|.|||||
BPUM_0362___g    691 CCATCGAAGCGTTTTGTTCAGCATGTTGCTTCATTCTGTCAGCAGCACGG    740

BSNT_00686___    738 CATTGTTTTTGTTGCTGATGAAATCCAAACCGGCTTTGCCAGAACTGGCA    787
                     .|||||.|||||.||.||||||||||||||.||||||||.|||||.||.|
BPUM_0362___g    741 GATTGTGTTTGTAGCAGATGAAATCCAAACAGGCTTTGCAAGAACAGGGA    790

BSNT_00686___    788 CTTATTTCGCAATTGAGCACTTTGATGTAGTGCCCGATCTGATCACGGTT    837
                     ..||.||.||.|||||||||||||||||.|||||.||..|.|||||.||.
BPUM_0362___g    791 AATACTTTGCGATTGAGCACTTTGATGTGGTGCCGGACTTAATCACTGTG    840

BSNT_00686___    838 TCTAAATCGCTTGCGGCAGGCCTGCCATTAAGCGGTGTGATTGGGCGTGC    887
                     ||.|||||.|||||.||.||..|||||.|||||||.||..|.|     ||
BPUM_0362___g    841 TCAAAATCTCTTGCTGCTGGGTTGCCACTAAGCGGCGTTGTCG-----GC    885

BSNT_00686___    888 GGAAA-----TGCTTGATGCGGCAGCGCCAGGGGAGCTGGGCGGCACGTA    932
                     .||||     |||||||||||||||..|||||||||||.||.||.||.||
BPUM_0362___g    886 AGAAAAGAACTGCTTGATGCGGCAGATCCAGGGGAGCTAGGGGGAACATA    935

BSNT_00686___    933 TGCCGGCAGCCCGCTCGGCTGCGCGGCGGCTTTGGCAG-TCTTGGATATT    981
                     .||.||.||.||..|.|||||.|.|||.||.||.|||| |||| ||||||
BPUM_0362___g    936 CGCAGGAAGTCCATTAGGCTGTGTGGCAGCATTAGCAGTTCTT-GATATT    984

BSNT_00686___    982 ATTGAAGAAGAAGGACTGAATGAGCGATCTGAAGAAATTGGCAAAATCAT   1031
                     ||||||..||||..|||||||.|.|||||||||.|.||.||..||.||||
BPUM_0362___g    985 ATTGAAACAGAACAACTGAATCAACGATCTGAACACATCGGACAAGTCAT   1034

BSNT_00686___   1032 TGAAGACAAGGCGTATGAGTGGA-AACAAGAATTCCCGTTCATCGGTGAC   1080
                     |||.|||||.||..||.|.|||| ||||| |||..||.|||||.||.||.
BPUM_0362___g   1035 TGAGGACAAAGCAAATCATTGGAGAACAA-AATATCCATTCATTGGGGAA   1083

BSNT_00686___   1081 ATCCGCAGACTCGGGGCGATGGCCGCAATCGAAATCGTCAAGGATCCTGA   1130
                     .|||||.|..|.|||||.|||||.|||||.|||||.||..|.||| |..|
BPUM_0362___g   1084 GTCCGCCGGTTAGGGGCAATGGCGGCAATTGAAATTGTGGAAGAT-CAAA   1132

BSNT_00686___   1131 C-ACGCGTGAGCCTGATAAGGCAAAAGCAGCAGCGATCGCGGCCTATGCG   1179
                     | ||||||...||.||||||..||.|||.||||||||.||..|.|||| |
BPUM_0362___g   1133 CAACGCGTACACCAGATAAGAAAACAGCCGCAGCGATTGCATCATATG-G   1181

BSNT_00686___   1180 AATC-AAAACGGATTACTTTTGCTGACAGCGGGAATTAACGGTAATATCA   1228
                     ||.| |..||||..|.||.||..|.||.||.||.|||||.||.|||||.|
BPUM_0362___g   1182 AAACGAGCACGGGCTGCTCTTATTAACGGCAGGGATTAATGGGAATATTA   1231

BSNT_00686___   1229 TCCGCTTTTTGACACCGCTCGTCATCTCAGA-CAGCCTATTAAATGAAGG   1277
                     |.|||||.||.|||||.||.||||||.|||| .|||...||.|| |||||
BPUM_0362___g   1232 TTCGCTTCTTAACACCACTTGTCATCACAGATGAGCTGCTTCAA-GAAGG   1280

BSNT_00686___   1278 GCTCAGCATCTTGGAGG-CGGGCCT-----GCGAGCTTAA   1311
                     .||..|.|||.|.|||| |  ||||     ||..|||.| 
BPUM_0362___g   1281 ACTAGGGATCATCGAGGAC--GCCTTCAAAGCACGCTAA-   1317


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