Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06062 and BPUM_0345
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_06062___yxeK.1.24716.seq
# -bsequence dna-align/BPUM_0345___yxeK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06062___yxeK-BPUM_0345___yxeK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06062___yxeK-BPUM_0345___yxeK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06062___yxeK
# 2: BPUM_0345___yxeK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1363
# Identity: 957/1363 (70.2%)
# Similarity: 957/1363 (70.2%)
# Gaps: 74/1363 ( 5.4%)
# Score: 3106.5
#
#
#=======================================
BSNT_06062___ 1 ATGACA-AGC--AAAAAGAAACAAATCAAATTAGGGGTATTTTTAGCGGG 47
.||.|| ||| ||||.|||.| ||||..||||.|||||..|.||.||
BPUM_0345___y 1 GTGTCACAGCCGAAAAGGAAGC---TCAAGCTAGGCGTATTCATCGCAGG 47
BSNT_06062___ 48 TACAGGCCATCATGTCGCGTCTTGGCGGCACCCGGACGCGCCG--TCAGA 95
.||.||.||||||||.||.||||||.|.||.|||.| .|||| |||||
BPUM_0345___y 48 AACTGGACATCATGTTGCCTCTTGGAGACATCCGAA--TGCCGTATCAGA 95
BSNT_06062___ 96 TGCGAG-CATGAATTTGGATTATTTTAAAGAGCTTGCGAAAACAGCGGAG 144
||| || ||||||..||||||||||||||.|..|.||.||||.|||.|||
BPUM_0345___y 96 TGC-AGCCATGAACCTGGATTATTTTAAACAATTAGCCAAAAAAGCAGAG 144
BSNT_06062___ 145 CGGGGCAAGCTGGATATGCTGTTTTTAGCGGACAGCCTTTCAATTGACAG 194
...||.|||||.|||.|.||.||||||||.||||||.|.||.|||.||
BPUM_0345___y 145 GAAGGAAAGCTAGATTTACTCTTTTTAGCCGACAGCTTATCCATTAAC-- 192
BSNT_06062___ 195 CAAA--TCACACCCAAATGTATTAACAAGGTTTGAGCCATTCACCCTGCT 242
|||| ||.||.||.||||||.|.|||||.|||||.||..||||||||||
BPUM_0345___y 193 CAAACCTCTCATCCGAATGTACTTACAAGATTTGAACCGCTCACCCTGCT 242
BSNT_06062___ 243 CTC-TGCTTTGGCGCAG-GTC-ACATCAAAAATCGGACTGACAGCAACAG 289
.|| |.|.|| ||.| ||| ||.|||...||.|||.|..|||||||||
BPUM_0345___y 243 TTCATCCATT---GCTGAGTCTACTTCATCCATTGGATTAGCAGCAACAG 289
BSNT_06062___ 290 CCTCCACTACATACAGCGAGCCATTCCATATTGCCAGACAGTTTGCCTCA 339
|.||||||||||||||.|||||.|||||||||||.||||||||||||||.
BPUM_0345___y 290 CATCCACTACATACAGTGAGCCTTTCCATATTGCAAGACAGTTTGCCTCC 339
BSNT_06062___ 340 TTGGATCATTTGTCCAATGGCCGTGCCGGATGGAACGTCGTCACATCATC 389
.|.||||||||.||....||..|.||.|.||||||.||.||||||||.||
BPUM_0345___y 340 CTTGATCATTTATCAGGCGGAAGAGCGGCATGGAATGTGGTCACATCTTC 389
BSNT_06062___ 390 TATTGAATCAACAGCGCTGAATTTCAGCGGTGAAAAGCACCTAGAACACC 439
|||||||..|||||||...||.||.|||||.|||.||||..|||..||||
BPUM_0345___y 390 TATTGAAGAAACAGCGAAAAACTTTAGCGGAGAAGAGCATTTAGCCCACC 439
BSNT_06062___ 440 ATTTGCGCTATCAGCGGGCAGAGGAATTTGTCGAGGTTGTAAAGGGGCTT 489
||...||.||..||||.|||||.||.||.||||||||.||.||.||.||.
BPUM_0345___y 440 ATAAACGATACGAGCGAGCAGAAGAGTTCGTCGAGGTCGTCAAAGGTCTG 489
BSNT_06062___ 490 TGGGATTCATGGGAAGAGGACGCCTTTATCCGTAATAAAGAAACGGGTGA 539
||||||||.||||||||.||||||.||.||.|.||.||.||||||||.||
BPUM_0345___y 490 TGGGATTCTTGGGAAGAAGACGCCCTTGTCAGAAACAAGGAAACGGGAGA 539
BSNT_06062___ 540 ATTCTTTGACAAAGAA------AAAATGCACGAGCTGAACCACAAAGGAG 583
|||||| .||| ||..|.||.|||||..|.||.|||||.|
BPUM_0345___y 540 ATTCTT------CGAATCTAGTAAGCTTCATGAGCTCCAGCATAAAGGGG 583
BSNT_06062___ 584 AATATTTCTCGGTTCGCGGACCTCTGAACGTTTCAAGAACGCCGCAGGGC 633
|.|..|||||.||.||.||.||.||.|||||.|||.|.|||||.||.||.
BPUM_0345___y 584 AGTTCTTCTCAGTACGAGGTCCACTTAACGTATCACGTACGCCTCAAGGG 633
BSNT_06062___ 634 CAGCCGGTCATTATCCAGGCAGGATCATCAGGAGACGG--AAAAGCGCTG 681
|||||.||.||.||.||||||||.|||||.|.|||.|| |||| |||.
BPUM_0345___y 634 CAGCCAGTGATCATTCAGGCAGGGTCATCCGAAGATGGTCAAAA--GCTT 681
BSNT_06062___ 682 GCTGCCAGAACAGCCGAAGTGATCTTCACAGCACAAAACCACCTGGAATC 731
||.||.|.|||.||.|||.|.||.||.||||||||||||.|.||.|||..
BPUM_0345___y 682 GCAGCGAAAACGGCTGAACTTATTTTTACAGCACAAAACGATCTCGAAAA 731
BSNT_06062___ 732 AGCTCAAGAATTTTATCAATCCATT-------AAAGAACAGGCTGCGGAA 774
|||..|.||||||||||||..| || ||||.|.|||.||||
BPUM_0345___y 732 AGCGAAGGAATTTTATCAAAGC-TTGAAGGAGAAAGTAGAGGATGCG--- 777
BSNT_06062___ 775 TTCGGACGTGATCCAGAAAAAATTGCCATTATGCCGGGTATTTTCCCAAT 824
||.||||.|..||||.|..|...|||.||||||||.||.|||||.||
BPUM_0345___y 778 ---GGTCGTGCTAGAGAAGACGTCAGCATCATGCCGGGGATATTCCCGAT 824
BSNT_06062___ 825 CATTGCTGATACAGAAGAAGCAGCGCAAGCCAAATACAAGGAGCTCCAAG 874
.||||||||||||||.||||.|||..||||.|||||..|.||..|.||.|
BPUM_0345___y 825 TATTGCTGATACAGAGGAAGAAGCCAAAGCGAAATATGAAGAATTACAGG 874
BSNT_06062___ 875 ATCTGATTATCCCATCTG---TCGGTCTGCAAATTCTCCAAAATTACTTA 921
|.||||||.|.| ||| |.||.|||...|||.|.|||||.||||||
BPUM_0345___y 875 AGCTGATTGTTC---CTGAGATTGGGCTGAGCATTTTGCAAAACTACTTA 921
BSNT_06062___ 922 GGCGGAATTGATTTGTCGGCGTATCCGCTTGATGGGCCGCTGCCGAAGCT 971
||.||.|||||||||||...||||||..|.||.||.||||||||..||.|
BPUM_0345___y 922 GGTGGGATTGATTTGTCTCAGTATCCTTTAGACGGCCCGCTGCCAGAGAT 971
BSNT_06062___ 972 TGACGCAGAAG--CTTCCAATGCGGTGAAGAGCCGCTTCAAGCTTGTTCA 1019
|||..| ||| |.||.||||||||.||.|||||.||..|.||.| |.|
BPUM_0345___y 972 TGATCC--AAGCACGTCAAATGCGGTAAAAAGCCGTTTTGATCTCG-TGA 1018
BSNT_06062___ 1020 GGAA-ATGGCTGA-ACGGGACAATATGACGATACGAGAGCTTTACAAATA 1067
.||| ||||| || |..|||..|..||||.||.||..||||.||..|||.
BPUM_0345___y 1019 TGAATATGGC-GAGAAAGGATCACCTGACCATTCGCCAGCTCTATCAATC 1067
BSNT_06062___ 1068 CGTTGCAGGCTCCAGAGGCCACCATATCTTCGTCGGCACGCCGGTGCAGC 1117
.|||||.|||||..|.||.||..||||.|||.|.||.||.|||..|||||
BPUM_0345___y 1068 AGTTGCCGGCTCTCGTGGTCATAATATTTTCATTGGTACACCGCAGCAGC 1117
BSNT_06062___ 1118 TCGCCGACAAGATGCAGGAATGGGTGGAT-AAGAA--AGCGTGTGACGGG 1164
||||.||...||||.|...||||.|..|| ||||| ||| .|||||.
BPUM_0345___y 1118 TCGCAGATGTGATGGAAACATGGATCAATGAAGAAGCAGC---AGACGGC 1164
BSNT_06062___ 1165 TTTAACATCATGCCTCCGCTTCTTCCAGAAGGAATTGAAGTGTTTGTTGA 1214
||||||.|||||||.|||||..|.||||||||..|.||..||||.||.||
BPUM_0345___y 1165 TTTAACGTCATGCCCCCGCTATTGCCAGAAGGGCTGGACATGTTCGTAGA 1214
BSNT_06062___ 1215 TCAAGTGGTTCCGATTTTACAGGAGCGCGGCGTGTTCAGAAAAGAATATG 1264
.|..||.||.||.||..|.||||||.|.|||.|.||.|.||.|||||||.
BPUM_0345___y 1215 CCGCGTCGTCCCAATCCTTCAGGAGAGAGGCTTATTTAAAACAGAATATA 1264
BSNT_06062___ 1265 AAGGCAC-AACATTAAGAGAGCACTTCGGTTTGGAAAAGCCGGTAAACCG 1313
.||| || |||.|||.||||..|..||||.||.|.|.||||...|||.||
BPUM_0345___y 1265 CAGG-ACAAACCTTACGAGAAAATCTCGGATTAGCACAGCCAAAAAATCG 1313
BSNT_06062___ 1314 CTATGCAAAGTAA 1326
|||..|.|..|||
BPUM_0345___y 1314 CTACACGACATAA 1326
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