Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00637 and BPUM_0329
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:25
# Commandline: needle
# -asequence dna-align/BSNT_00637___yczE.1.24716.seq
# -bsequence dna-align/BPUM_0329___yczE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00637___yczE-BPUM_0329___yczE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00637___yczE-BPUM_0329___yczE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00637___yczE
# 2: BPUM_0329___yczE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 695
# Identity: 451/695 (64.9%)
# Similarity: 451/695 (64.9%)
# Gaps: 97/695 (14.0%)
# Score: 1394.5
#
#
#=======================================
BSNT_00637___ 1 GTGAAGCAAGAACTTGTTCTGCGCTGGACATTTTATTTTGCCGGTTTGAT 50
.||||||..||||.|.||.|.||.|||...||||||||||..||.|||||
BPUM_0329___y 1 TTGAAGCGGGAACATCTTTTACGTTGGTTTTTTTATTTTGTTGGATTGAT 50
BSNT_00637___ 51 CATTTTGGCTTTTGGTGTATCCCTGACGATAGAAGGAAAAGCACTCGGCA 100
|.|..|.||||||||..||||.|||||..|..|||||||....||.||.|
BPUM_0329___y 51 CGTACTAGCTTTTGGACTATCACTGACAGTGAAAGGAAAGATTCTTGGGA 100
BSNT_00637___ 101 TTAGTCCGTGGGATGCATTTCATTACAGCCTGTTTCAGCACTTCGGGCTT 150
||.||||.|||||.||.||.||||||.|.|||||||||||.||.||.||.
BPUM_0329___y 101 TTGGTCCTTGGGACGCTTTCCATTACGGACTGTTTCAGCATTTTGGACTG 150
BSNT_00637___ 151 ACCGTCGGCCAGTGGTCCATCATTATTGGAGCGCTCATCGTCGGATTCAC 200
||..|.||.||||||||||||||||||||.||.|||||.||...|.|.||
BPUM_0329___y 151 ACGATTGGACAGTGGTCCATCATTATTGGTGCACTCATTGTGACACTAAC 200
BSNT_00637___ 201 GTCATTGTTTACGAGAGCTTGGCCGAAAATTGGGGCCCTCCTGAATATGG 250
.||..|.|||||||.|.|.|..||.||.||.||.||..|.|||||.||||
BPUM_0329___y 201 TTCTGTTTTTACGAAATCATTTCCAAAGATCGGCGCATTACTGAACATGG 250
BSNT_00637___ 251 TGCTCATTGGTGTATTTATAGATTTTTTCAAT----TTCATTCTGCCTGC 296
||||.||||||.|.|||||||||||.||.||| | || |||||||
BPUM_0329___y 251 TGCTGATTGGTATGTTTATAGATTTCTTTAATGCGGT--AT--TGCCTGC 296
BSNT_00637___ 297 CCCCTCGAC--------CTACACAGGCTCGATCATCGTCTTCTCTCTA-- 336
.|| || .|||.| |||..|| || ||.|| ||
BPUM_0329___y 297 ACC----ACATGGGTATTTACCC--GCTTTAT-AT-GTGTT-----TATT 333
BSNT_00637___ 337 ---GGCGTGGTGCTGATT--GGTTACGGCGTCGGTGTTTATGTATCAGCA 381
|||||.||| |.|| ||.||.||.||.||..|||||||.||.||.
BPUM_0329___y 334 ACGGGCGTTGTG--GTTTCAGGATATGGTGTTGGCATTTATGTCTCCGCG 381
BSNT_00637___ 382 GGCCTTGGCGCGGGGCCGCGTGATTCACTGATGATGCTGATTACAGAAAA 431
...||||||||.|||||..|.||||||.|.|||.|.||.||..|||..||
BPUM_0329___y 382 AATCTTGGCGCCGGGCCAAGAGATTCATTAATGCTCCTCATCTCAGCGAA 431
BSNT_00637___ 432 AACCGGCTGGAATGTGCAATGGGTGCGGAACGGCATGGAATTAACCA--- 478
|||.||.|.|||.|||||.||||||||.||.|||||.||.|||| ||
BPUM_0329___y 432 AACTGGATTGAACGTGCAGTGGGTGCGAAATGGCATTGAGTTAA-CAGTG 480
BSNT_00637___ 479 -TTTTGTTTGCGGCATGGGGCATG---GGCGGACCGATCGGTTTTGGCAC 524
|||||||| |||||| ||| |||||||||||.||..|||||||
BPUM_0329___y 481 CTTTTGTTT---GCATGG---ATGCTCGGCGGACCGATTGGCGTTGGCAC 524
BSNT_00637___ 525 CATTTTGACCGCCATCCTCACCGGACTCATTCTGCGTTTTTCATTGCCGC 574
.|||.||||.||.||..||||.||.|||.|.||.||.||.||.|||||.|
BPUM_0329___y 525 GATTCTGACGGCTATTTTCACAGGTCTCGTCCTTCGATTCTCTTTGCCAC 574
BSNT_00637___ 575 AGTCAA------TCC---AGTTGCTGAATTATGCTGTGGCAAGGCGGACA 615
|.||.| ||| ||.|||| .|||| || |.|
BPUM_0329___y 575 AATCGACACGTCTCCTAGAGCTGCT-TATTA--------CA------AAA 609
BSNT_00637___ 616 GCCGCTGTGAAAGCATCTCCGCCTGT----ACACTAA-------- 648
.|.||.|.|||| ||||| ||.||.|
BPUM_0329___y 610 ACAGCAGAGAAA---------CCTGTTCAGACGCTTATCCGATAA 645
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