Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00551 and BPUM_0288
See
Amino acid alignment /
Visit
BSNT_00551 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:21
# Commandline: needle
# -asequence dna-align/BSNT_00551.1.24716.seq
# -bsequence dna-align/BPUM_0288___ycgI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00551-BPUM_0288___ycgI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00551-BPUM_0288___ycgI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00551
# 2: BPUM_0288___ycgI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 641
# Identity: 367/641 (57.3%)
# Similarity: 367/641 (57.3%)
# Gaps: 166/641 (25.9%)
# Score: 1015.0
#
#
#=======================================
BSNT_00551 1 ATGACAC--AGCAATAT---ATTGTGGAGCCGAAAAAAGGGCTG---GGG 42
|||| || || ||||| |||.| |..|||||||.| .||
BPUM_0288___y 1 ATGA-ACGGAG-AATATGTCATTTT-------ACCAAAGGGCAGACTCGG 41
BSNT_00551 43 CTGAAGCT---GAAAAAGGGGCAGAT-TTTAAAGGTGGTTGATGTAGAAG 88
||...|.| ||||| |||..|| |.|...||||||||||||.||||
BPUM_0288___y 42 CTTTCGTTTAGGAAAA---GGCCAATGTATGCGGGTGGTTGATGTTGAAG 88
BSNT_00551 89 GGCAGCAGGTGGCTGATTTTGTCGCATACCATGCCAAGGATTTTTATGAA 138
|.|||||.||.||.|||.|..|.||.||.||||..|||||||||||||||
BPUM_0288___y 89 GACAGCAAGTAGCAGATGTAATGGCCTATCATGAAAAGGATTTTTATGAA 138
BSNT_00551 139 CACCTTGATCAGGGAGCGACGATAGAC-GCCAATCACTCCATTCATGT-G 186
.|..||||.||.||.|||||.||.||| |||.|| .||| || .
BPUM_0288___y 139 AAATTTGACCAAGGTGCGACAATGGACAGCCTAT------TTTC--GTCA 180
BSNT_00551 187 AAGGTCAA------CGACCATCTCTACTCCAACCTGTATAAGCCGATGTT 230
|||||.|| |||..|.||.||.||.|||.|.||.||.||||||||
BPUM_0288___y 181 AAGGTAAAAAAAGGCGATAAGCTTTATTCTAACTTATACAAACCGATGTT 230
BSNT_00551 231 AACCCTGATTGAAGATACGGTCG---GCAAGCATGATCTGCTGC-TGCCC 276
.||..|.||||||||.||.|||| || |||||| |..|.| |||||
BPUM_0288___y 231 TACGGTCATTGAAGACACAGTCGAATGC---CATGAT-TTATACATGCCC 276
BSNT_00551 277 GCCTGCCGTCCTGATATG-AACAGGCTCTTATATG---GGAAGCA---AA 319
||||||||.|..||.||| |.|| |||.||||||| |||.||| |.
BPUM_0288___y 277 GCCTGCCGGCAAGAAATGTATCA-GCTTTTATATGGACGGACGCATTTAG 325
BSNT_00551 320 AGGATGAGTTTCA-GGATACGTGCTATGACAATATGAACCG---TGCGCT 365
||| ||| |.||||.|||||.||.|||.|| || |||..|
BPUM_0288___y 326 AGG-------TCATGCATACATGCTACGATAATTTG---CGGAATGCCTT 365
BSNT_00551 366 TGAGCAGTTTGGCGTACCGAAGCCTCACATGCATTACCCATT---TGCGA 412
|||.|..|||||..|.||||||....|.|||.|.||.||.|| |||
BPUM_0288___y 366 TGAACCATTTGGGATTCCGAAGGAGGATATGTACTATCCTTTTAATGC-- 413
BSNT_00551 413 TTTTTATGAATACTGTCCTTGATGAGAAAGGGAATCTGTCTGTGG----- 457
.|||||||||||.|||.|||||||.|||||.||.||||||||||
BPUM_0288___y 414 -CTTTATGAATACAGTCATTGATGAAAAAGGAAAGCTGTCTGTGGAGCTG 462
BSNT_00551 458 ---AAA------CGCCG-------CTTTCGAATGC---CGGAGATGGATT 488
||| | ||| |.||||..||| |.||.|||||..
BPUM_0288___y 463 CCAAAATCTCTTC-CCGGTGATTACATTCGTCTGCGAGCCGAAATGGACC 511
BSNT_00551 489 TAATTGTCGCGTTTTC-----TTCCTGCCCGATTGA-------------- 519
|.|||||.||..|.|| .|||||| |||
BPUM_0288___y 512 TCATTGTGGCCGTATCCGCATGTCCTGC-----TGATATTGGAAAGTGTA 556
BSNT_00551 519 ----------------------------------------- 519
BPUM_0288___y 557 ATGGCGCAAGCTGTACATCGATACGGGTTGAAATTGATTGA 597
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.