Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01793 and BPUM_0280
See
Amino acid alignment /
Visit
BSNT_01793 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:17
# Commandline: needle
# -asequence dna-align/BSNT_01793___yhjL.1.24716.seq
# -bsequence dna-align/BPUM_0280___yhjL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01793___yhjL-BPUM_0280___yhjL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01793___yhjL-BPUM_0280___yhjL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01793___yhjL
# 2: BPUM_0280___yhjL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1492
# Identity: 863/1492 (57.8%)
# Similarity: 863/1492 (57.8%)
# Gaps: 332/1492 (22.3%)
# Score: 2216.5
#
#
#=======================================
BSNT_01793___ 1 ATGCAAAAACAGGTT----AAGATTTCAGGTAAAAGCAAAGAAAACATGT 46
|||||||.| || |||||.||||||||||||||.| |..||.|
BPUM_0280___y 1 ATGCAAATA----TTGACGAAGATATCAGGTAAAAGCAAGG--ATTATCT 44
BSNT_01793___ 47 CACTAT-----------TAAAACACTTAAAAGGTGACGTACAAGGAAAAG 85
..||.| |.||.| ||||| ||.||||.|||
BPUM_0280___y 45 TCCTTTGCTGGATATGATCAATC------AAGGT---GTTCAAGTAAA-- 83
BSNT_01793___ 86 AACTTGTTATTGAAGACAGTATTGTAAACGAGCGGTG-GAAACAAGTATT 134
.|.|.||| |||| || |||.||..||..
BPUM_0280___y 84 ---GTCTGATT-----CAGT---------------TGAGAAGCACCTAGC 110
BSNT_01793___ 135 AAAAGAAAAGAT------------------AGATATTG------------ 154
|||.||||||.| ||||||.|
BPUM_0280___y 111 AAATGAAAAGCTGGTGACGTTCCTTGAGCAAGATATAGGACGCACAGGCT 160
BSNT_01793___ 155 -----AACATGACCTTTTCAACTATCAAAAAAATCGTGAAATCAGTAAAG 199
||.|| .||.|||.|.|||.||.|||||...|||| .||||
BPUM_0280___y 161 TGGAAAAAAT--TCTCTTCCATTATAAACAAAATAAGGAAA----AAAAG 204
BSNT_01793___ 200 -TCCCTTTTTTGCCTGTAGACAGATTAATAACCAATGATGAAGTGGAAGA 248
|.||.|||.|.||.||.||.|.|.|.||..|..|.|||||..|.||.||
BPUM_0280___y 205 ATACCGTTTCTACCAGTCGATAAACTGATTTCAGAGGATGAGATCGATGA 254
BSNT_01793___ 249 TAT----------CTTAAATACATTAACTGAAGTTTTGCCAACTGGAAAA 288
.|| ||.||| |||||.|||....||||....
BPUM_0280___y 255 CATTATGCAGGTGCTGAAA----------GAAGTATTGAGCTCTGGCCGT 294
BSNT_01793___ 289 TTTACGAGTGGCCCCTATTTAGAGCAATTC--------GAAAA------C 324
|||||....||.||.||| |||| ||||| |
BPUM_0280___y 295 TTTACTTCAGGACCATAT--------ATTCCGGCGTTTGAAAAGCAGCTC 336
BSNT_01793___ 325 GTTTTATCTACATATTTACATAAAAGGTATGTAATTGCAAC--CAGCAGT 372
| ||...||||||...||.|..|||||.|||||.|| || |||
BPUM_0280___y 337 G------CTGAGTATTTAGGGAAGAAATATGTTATTGCTACGTCA--AGT 378
BSNT_01793___ 373 GGAACCGATGCTATTATGAT-AGGTT--TATTGGCTTTAGGGTTAAACCC 419
|||||.|||||..|.||||| ||..| |||..|| |||..|..|.||
BPUM_0280___y 379 GGAACTGATGCCCTAATGATCAGCCTCATATCAGC---AGGCGTCCATCC 425
BSNT_01793___ 420 AGGGGATGAAGTTATCATGCCGGCTAATAGCTTTTCAGCTACTGAAAATG 469
|||.||.|||||.||..||||.||.|||||||||.|.||.||.|||||||
BPUM_0280___y 426 AGGAGAGGAAGTCATTTTGCCAGCAAATAGCTTTGCTGCAACAGAAAATG 475
BSNT_01793___ 470 CTGTGTTAGC-TTTGGGAGGC-GTTCCTATCTATGTAGATATTAACCCAC 517
|.|||.|.|| .|||| ||| |||||..||||||.|||||||.|.|||.
BPUM_0280___y 476 CAGTGCTTGCGATTGG--GGCTGTTCCGGTCTATGCAGATATTGATCCAG 523
BSNT_01793___ 518 AAACATTCTGCATCGATCC---TGACAAAATTGAAGAAGCA-ATAACTCC 563
|.||.|.||||||.|..|| || ||||.| ||||||| ||.||
BPUM_0280___y 524 ATACTTACTGCATGGCACCGAGTG---AAATAG-AGAAGCATATCAC--- 566
BSNT_01793___ 564 TTATA-CAAA----GTTTATTCTACCTGTGCATTTATACGGAAAACATTC 608
|.| |||| .|..|||||.||.||.||||||||.||||||||..|
BPUM_0280___y 567 --AGATCAAACGGCATGCATTCTTCCGGTTCATTTATATGGAAAACAAGC 614
BSNT_01793___ 609 AGACATGCAG--CATATC--CGTCAAATCGC---AAATCGTTATGAATTA 651
.||.|||.|| .||.|| || ||.|| |||.| |||...|.
BPUM_0280___y 615 GGATATGAAGGCGATTTCGGCG----ATTGCGAAAAAGC---ATGGGCTG 657
BSNT_01793___ 652 AAAGTAATTGAAGATGCCTGCCAAGGAATTGG----ACTGACAGACTTAG 697
|||.|.||||||||||.|||.||.|..||.|| || |.|.|||.|
BPUM_0280___y 658 AAAATCATTGAAGATGGCTGTCAGGCGATCGGCAGCAC---CGGCCTTGG 704
BSNT_01793___ 698 -GAAAGTATGCAGACATCACTACAT----------TAAGTTTTAATCCCT 736
|.| ||||.|| || |.||.||||||||.|
BPUM_0280___y 705 CGCA--TATGGAG----------ATGGGCTTGTTCTTAGCTTTAATCCAT 742
BSNT_01793___ 737 ATAAGAATTTGGGTGTATGTGGCAAGGCTGGGGCAATAGCAACTGATAAT 786
|.||.|||.|.|||||.||.||||||||.||.||.||.||.||..||.||
BPUM_0280___y 743 ACAAAAATCTTGGTGTTTGCGGCAAGGCGGGAGCCATCGCGACAAATGAT 792
BSNT_01793___ 787 GAAGAACTCGCTAAAAAATGCATTCAATTTAGTTATCACGGTTTTGAAGT 836
||||...|.||..|||||||.||..||.|.||.||||||||.||||||||
BPUM_0280___y 793 GAAGCTTTAGCAGAAAAATGTATGGAAATCAGCTATCACGGCTTTGAAGT 842
BSNT_01793___ 837 A--AATGTAAAAAATAAGAAAGTCATCAATTTTGGATTTAATTCAAAAAT 884
| ||.| ||||||...|||..||...|.|.|||.||||||||.|||||
BPUM_0280___y 843 AGGAAAG--AAAAATGTCAAACGCAGTGACTATGGCTTTAATTCGAAAAT 890
BSNT_01793___ 885 GGACAATTTACAGGCAGCAATTGGTTTAGAGAGAATGAAGTACCTTT--C 932
.||.|||||.|||||.||.|||||..|.||..|.|||||||| ||| .
BPUM_0280___y 891 TGATAATTTGCAGGCGGCGATTGGACTCGAACGCATGAAGTA--TTTAGG 938
BSNT_01793___ 933 ATTAAACAACTTCAAAAGACTGTTCTTGGCGGATAGATACATTACCCAAT 982
||||.|.|||||.|||.|..|.|.|||.||..|..|.||||||..|||..
BPUM_0280___y 939 ATTACAAAACTTTAAACGTTTCTACTTAGCAAAGCGCTACATTGACCAGC 988
BSNT_01793___ 983 TAGCAGA-GTTGCAGAATAAAGGCTTTA-TTGAA--TTACCAGAATTAAG 1028
| |||.| |.|..||.||.|||| .|| ||||| ||.| ||||
BPUM_0280___y 989 T-GCAAACGCTAGAGGATGAAGG--ATACTTGAAGCTTCC------TAAG 1029
BSNT_01793___ 1029 -----TGAAGATCATGTATGGCATCTGTTTCCTATTAAGGTGAGAACAGA 1073
.||.|||||||||||||||.||||.||.||.|.|||| |.||
BPUM_0280___y 1030 CTGACAGATGATCATGTATGGCATTTGTTCCCGATCAGGGTG----CTGA 1075
BSNT_01793___ 1074 AGATAGAGC-AGAT-ATCATG--ACTAAATT-----AAATGAAGATTTTG 1114
||..|||.| |||| |.|.|| .|.||||| ||||| |
BPUM_0280___y 1076 AGGGAGAACGAGATGAGCTTGCCGCGAAATTGCTGGAAATG--------G 1117
BSNT_01793___ 1115 GTGTTCAAACAGATGTATATTATCCAATACTGTCTCAT----ATGCAA-- 1158
|..|..|.||||||||.|||||.|||||.||.||.||| || |||
BPUM_0280___y 1118 GCATAGAGACAGATGTTTATTACCCAATCCTATCGCATCAGCAT-CAAAC 1166
BSNT_01793___ 1159 AAAACTCCTTT------AGTACA---GGACAAGTATGCAGGACTCCCATT 1199
|||.|||.||| ||||.| ||||.| ||.|
BPUM_0280___y 1167 AAATCTCGTTTCTCAAAAGTATAAACGGACGA--------------CACT 1202
BSNT_01793___ 1200 GGTTCATACGGAAAAGGC-TCATAGTCAGGTACTGCATTTGCCTTTATAT 1248
|...||.||||||||.|| .||.|| ||..||||.||..||||..|.|||
BPUM_0280___y 1203 GCCGCACACGGAAAAAGCAGCACAG-CAATTACTTCACCTGCCGCTGTAT 1251
BSNT_01793___ 1249 CC-GTCAT-TTACTTTAG-AAGAACAAGACAGAGTAATGGAGGGACTGTT 1295
|| |.||| ..||| | ||||.||.||.|..||.||.||||| .|||
BPUM_0280___y 1252 CCAGGCATGCCACT---GCAAGATCAGGAGAAGGTCATCGAGGG--GGTT 1296
BSNT_01793___ 1296 --TCATGTTATTAAG---------CAAGAAATCGGAGTATAA 1326
|||||||||.||| |||.||
BPUM_0280___y 1297 CATCATGTTATCAAGTCTTCCATTCAATAA------------ 1326
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.