Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00530 and BPUM_0272
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:21
# Commandline: needle
# -asequence dna-align/BSNT_00530___opuAC.1.24716.seq
# -bsequence dna-align/BPUM_0272___opuAC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00530___opuAC-BPUM_0272___opuAC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00530___opuAC-BPUM_0272___opuAC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00530___opuAC
# 2: BPUM_0272___opuAC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 907
# Identity: 650/907 (71.7%)
# Similarity: 650/907 (71.7%)
# Gaps: 50/907 ( 5.5%)
# Score: 2216.5
#
#
#=======================================
BSNT_00530___ 1 ATGCTTAAAAAAATC-ATCGGCATCGGCGTTTCCGCCATGCTGGCGCTCT 49
||| |..|||||.|| .||..|||.||..|..|||||.||||.|...|.|
BPUM_0272___o 1 ATG-TGGAAAAAGTCTCTCTACATTGGGATGACCGCCCTGCTTGTCTTTT 49
BSNT_00530___ 50 CACTTGCGGCTTGCGGTTCAGAAAAC-GAAAAAAATGCATCCGCAGCAGA 98
.|||.||.|||||.|||.|| ||..| ||...||||||....||.|||.|
BPUM_0272___o 50 TACTAGCAGCTTGTGGTGCA-AAGTCGGACTCAAATGCGAGTGCGGCACA 98
BSNT_00530___ 99 ACAGGTGAATAAGACCATCATCGGGATTGACCCCGGTTCAGGGATTATGT 148
.|||||||||||.|||||.|||||.|||||.||.|||||||||||||||.
BPUM_0272___o 99 GCAGGTGAATAAAACCATTATCGGCATTGATCCTGGTTCAGGGATTATGG 148
BSNT_00530___ 149 CCCTGACTGACAAAGCGATGAAGGATTATGACCTGAATGACTGGACATTG 198
|.||.||.||..||||||..||||||||.|.|.|..|.||.|||||..|.
BPUM_0272___o 149 CGCTAACGGATCAAGCGAAAAAGGATTACGGCTTAGAGGATTGGACGGTC 198
BSNT_00530___ 199 ATTTCTGCGTCAAGTGCTGCGATGACCGCTACGCTTAAAAAGTCATACGA 248
.|.|||||.||||||||.||.|||||.||.||.||.||.||.||.|||||
BPUM_0272___o 199 GTGTCTGCATCAAGTGCAGCCATGACTGCAACACTCAAGAAATCTTACGA 248
BSNT_00530___ 249 CCGTAAGAAACCGATTATCATTACAGGATGGACACCGCACTGGATGTTCT 298
||||||.||.||.||.|||||.||.||.||||..||.|||||||||||.|
BPUM_0272___o 249 CCGTAAAAAGCCCATCATCATCACTGGTTGGAATCCACACTGGATGTTTT 298
BSNT_00530___ 299 CTAGATATAAGCTGAAATATCTCGATGATCCGAAACAATCTTATG--GCA 346
||.|.|||.|..|.||||||.|.||||||||.||..|||||||.| |.|
BPUM_0272___o 299 CTCGCTATGATTTAAAATATTTAGATGATCCAAAGAAATCTTACGGTGAA 348
BSNT_00530___ 347 GCGCAGAGGAAATCCATACGATCACACGCAAAGGCTTCAGCAAA-GAACA 395
||| ||.||.||.||||||||..|.||.||.||.|| .||||| ||..|
BPUM_0272___o 349 GCG--GAAGAGATTCATACGATTTCTCGTAAGGGGTT-TGCAAAGGATGA 395
BSNT_00530___ 396 GCCGAATGCCGCAAAGCTTCTGAGCCAGTTTAAATGGACGCAAGACGAAA 445
||||.||||.||.||..|.||..|.||||||||||||.|.|||||.||.|
BPUM_0272___o 396 GCCGGATGCAGCCAAAATGCTTGGTCAGTTTAAATGGTCTCAAGATGACA 445
BSNT_00530___ 446 TGGGCGAAATCATGAT-------CAAGGTGG-AGGAAGGCGAGAAACCTG 487
||||||||.||||||| ||||.||| |..|| .
BPUM_0272___o 446 TGGGCGAAGTCATGATCGATATCCAAGATGGTATCAA------------T 483
BSNT_00530___ 488 CCAAA-GTTGCTGCCG---AGTACGTCAATAAACACAAGGATCAGATTGC 533
||||| |.|||||||| |.||.||.||.|||||.||.||.||..|.||
BPUM_0272___o 484 CCAAAGGATGCTGCCGTTAAATATGTGAAAAAACATAAAGACCAAGTAGC 533
BSNT_00530___ 534 CGAATGGACAAAAGGCGTTCAAAAGGTAAAGGGAGACAAAATCAACCTTG 583
..||||||||||||||||..||||....||.||.|.||||.||||.||||
BPUM_0272___o 534 AAAATGGACAAAAGGCGTGAAAAAATCGAATGGTGCCAAAGTCAATCTTG 583
BSNT_00530___ 584 CCTATGTGGCGTGGGACAGTGAGATTGCAAGTACAAACGT--CATAGGCA 631
||||.||.||.|||||.|||||||||||||||||.||.|| | .|||
BPUM_0272___o 584 CCTACGTTGCATGGGATAGTGAGATTGCAAGTACCAATGTTGC---TGCA 630
BSNT_00530___ 632 -AAGTCTTAGAAGACTTGGGCTATGAGGTAA---CACTT--ACTCAGGTA 675
||||.|| .|.||.|||..||..||| .|||| ||||||||.
BPUM_0272___o 631 GAAGTGTT-----GCGTGAGCTCGGATTTAAAGTGACTTTGACTCAGGTG 675
BSNT_00530___ 676 GAGGCTGGGCCGATGTGGACTGCAATTGCGACGGGAAGTGCGGATGCATC 725
||.||.||.||.||||||||.||||||||.||.|||||||||||||||||
BPUM_0272___o 676 GAAGCAGGTCCAATGTGGACAGCAATTGCAACTGGAAGTGCGGATGCATC 725
BSNT_00530___ 726 CCTTTCCGCATGGCTGCCGAATACCCATAAAGCATACGCCGCTAAATATA 775
..|.||.||.||||||||.|||||.||||||.|.||.||.||.||.|.||
BPUM_0272___o 726 ATTATCTGCTTGGCTGCCAAATACGCATAAAACGTATGCAGCAAAGTTTA 775
BSNT_00530___ 776 AAGGCAAATATGATGATATTGGCACAAGTATGACGGGTGTGAAGATGGGG 825
||||.||||||||||||.|.||.||||||||||..|||.|....|||||.
BPUM_0272___o 776 AAGGGAAATATGATGATCTAGGTACAAGTATGAAAGGTCTTCGCATGGGT 825
BSNT_00530___ 826 CTTGTTGTTCCTCAATATATGAAAAATGTCAACTCAATTGAAGATTTGAA 875
||.||||||||...|||||||||.||.||||||||.||||||||||||||
BPUM_0272___o 826 CTAGTTGTTCCGACATATATGAAGAACGTCAACTCGATTGAAGATTTGAA 875
BSNT_00530___ 876 GAAGTAA 882
.||.||.
BPUM_0272___o 876 AAAATAG 882
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