Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00529 and BPUM_0271
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:21
# Commandline: needle
# -asequence dna-align/BSNT_00529___opuAB.1.24716.seq
# -bsequence dna-align/BPUM_0271___opuAB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00529___opuAB-BPUM_0271___opuAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00529___opuAB-BPUM_0271___opuAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00529___opuAB
# 2: BPUM_0271___opuAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 853
# Identity: 664/853 (77.8%)
# Similarity: 664/853 (77.8%)
# Gaps: 11/853 ( 1.3%)
# Score: 2555.0
#
#
#=======================================
BSNT_00529___ 1 ATG---GATAGACTGCCTAGAATACCTTTAGCAGA-TATCATTGACCGTT 46
||| ||| .|.||||||||.||.||.||.|| ||| ||.||.|..|
BPUM_0271___o 1 ATGAGTGAT---TTACCTAGAATTCCGTTCGCGGATTAT-ATCGATCAAT 46
BSNT_00529___ 47 TTGTTGACTGGATTACGATGACGTTTGGCGGATTCTTCGACGGAATCGCT 96
|||||||||||.|.||..|.||||||||.||.|||||.||.||.|||.|.
BPUM_0271___o 47 TTGTTGACTGGTTAACATTAACGTTTGGTGGTTTCTTTGATGGCATCACA 96
BSNT_00529___ 97 AACGGATTGGCCGCTTTTGTAAATGGAATTGTCACCGGTCTTGGATTTAT 146
||.|||||.||.|.....||||||||||||||..|.|..|||||..|.||
BPUM_0271___o 97 AATGGATTAGCAGGCACAGTAAATGGAATTGTGGCAGCACTTGGTGTGAT 146
BSNT_00529___ 147 TCCATCTATTTTGTTAACGATTATTTTCGCCGCACTTGCGTGGTGGATCA 196
||||||||||.|.|||||..|||||||.||||...||||.||||||||||
BPUM_0271___o 147 TCCATCTATTATTTTAACCCTTATTTTTGCCGGTATTGCTTGGTGGATCA 196
BSNT_00529___ 197 GTACAAGGGGAATTGCGTTATTTACGTTGATTGGATTCCTCCTGATCGAT 246
|||||||.|||.||||..|.||.||..|.||.||.||..|.||||||||.
BPUM_0271___o 197 GTACAAGAGGAGTTGCTCTTTTCACACTTATCGGGTTTTTACTGATCGAC 246
BSNT_00529___ 247 TATTTAGGTTATTGGGACCCAATGCTGCAAACATTGGCGCTTGTGTTGAC 296
||||||||.||.|||.|.||||||||.||||||.|.|||||.||.||.||
BPUM_0271___o 247 TATTTAGGCTACTGGCATCCAATGCTTCAAACACTTGCGCTCGTTTTAAC 296
BSNT_00529___ 297 ATCTGTGATTATTTCGATTGTGGTCGGGGTTCCGATCGGAATTTGGGCGT 346
..|||||.|.|||||.||.|||.||||.||.||||||||.||||||||.|
BPUM_0271___o 297 TGCTGTGGTCATTTCCATCGTGATCGGAGTCCCGATCGGTATTTGGGCAT 346
BSNT_00529___ 347 CTCAGAAAGAAACGGTTCGCCGTATTGTAACGCCAATTCTTGATTTAATG 396
|.|||||.|||||.||.||....||||||||.||.|||.|.|||||.|||
BPUM_0271___o 347 CACAGAAGGAAACTGTGCGTAAAATTGTAACACCTATTTTAGATTTGATG 396
BSNT_00529___ 397 CAGACAATGCCTGCTTTCGTATATCTATTGCCGGCGATTTTCTTCTTTAA 446
|||||||||||.||.|||||.||||||||.||.||.||.|||||||||||
BPUM_0271___o 397 CAGACAATGCCAGCATTCGTTTATCTATTACCCGCCATCTTCTTCTTTAA 446
BSNT_00529___ 447 CATCGGTGTTGTGCCGGGTGTTGTTGCATCTGTTATCTTCGCGATGCCGC 496
|||.||.||||||||.||.|||||.|||||.|||||.|||.|.|||||||
BPUM_0271___o 447 CATTGGGGTTGTGCCTGGCGTTGTGGCATCCGTTATTTTCTCTATGCCGC 496
BSNT_00529___ 497 CGACAATCCGCATGACTGTTCTCGGTATTAAACAAGTGCCGGCGGATCTG 546
|.||.||.||.|||||..|||||||||||||||||||.||..|.|||.|.
BPUM_0271___o 497 CAACGATTCGTATGACGATTCTCGGTATTAAACAAGTACCTTCTGATTTA 546
BSNT_00529___ 547 ATTGAAGCAACTGAGGCATTCGGTTCTACAACAGCTCAGCGTTTGTTTAA 596
|||||||||||.||.||.||.|||||.||.|||...|||||||||||.||
BPUM_0271___o 547 ATTGAAGCAACAGAAGCCTTTGGTTCAACGACATTCCAGCGTTTGTTCAA 596
BSNT_00529___ 597 AGTTCAGCTTCCGCTTGCGACAAAAACGATTTTGGCCGGAATTAACCAGA 646
||||||||||||.|||||.||||||||.||..|.||.||.||||||||.|
BPUM_0271___o 597 AGTTCAGCTTCCACTTGCAACAAAAACCATCCTAGCTGGTATTAACCAAA 646
BSNT_00529___ 647 GCATCATGCTTGCGTTATCAATGGTTGTTATCGCCGCAATGGTCGGTGCA 696
|.|||||||||||..|||||||||||||||||||.||||||||.||||||
BPUM_0271___o 647 GTATCATGCTTGCTCTATCAATGGTTGTTATCGCAGCAATGGTAGGTGCA 696
BSNT_00529___ 697 CCGGGACTTGGTTCTGAAGTATACAGTGCCGTTACACAGCTGAAAACCGG 746
||.|||||||||||.||||||||.|||||.||.||.|||||||||||.||
BPUM_0271___o 697 CCAGGACTTGGTTCAGAAGTATATAGTGCGGTAACGCAGCTGAAAACAGG 746
BSNT_00529___ 747 GGTCGGAGTAGAGGCCGGTATCGCCATCGTTATCGTTGCCATTACGCTGG 796
..|.||..|.||.||.|||||.|||||.|||||.||.||.|||||.||.|
BPUM_0271___o 747 AATTGGTTTTGAAGCAGGTATTGCCATTGTTATTGTGGCAATTACACTTG 796
BSNT_00529___ 797 ACCGTATTACTCAAAATATTAAAGTGAAGAAGAAAAGCAGGGGGAATGCC 846
||||||||||.||.||.|||||| |.|||.||||.||||||||||||.
BPUM_0271___o 797 ACCGTATTACACAGAACATTAAA---ACGAAAAAAACCAGGGGGAATGCT 843
BSNT_00529___ 847 TGA 849
|.|
BPUM_0271___o 844 TAA 846
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