Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00528 and BPUM_0270
See
Amino acid alignment /
Visit
BSNT_00528 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:20
# Commandline: needle
# -asequence dna-align/BSNT_00528___opuAA.1.24716.seq
# -bsequence dna-align/BPUM_0270___opuAA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00528___opuAA-BPUM_0270___opuAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00528___opuAA-BPUM_0270___opuAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00528___opuAA
# 2: BPUM_0270___opuAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1289
# Identity: 962/1289 (74.6%)
# Similarity: 962/1289 (74.6%)
# Gaps: 55/1289 ( 4.3%)
# Score: 3533.0
#
#
#=======================================
BSNT_00528___ 1 ATGA---GTGTAGATGAGAAA----CCAATTAAGATAAAAGTCGAGAAAG 43
|||| .||.||| |||||| ..|||.||||||| |.||.|
BPUM_0270___o 1 ATGAATTCTGAAGA-GAGAAATATCAAAATCAAGATAA------ATAATG 43
BSNT_00528___ 44 TCTCTAAGATTTTTGGGAAACAAACAAAGAAGGCAGTTCAAATGCTTGCC 93
|.|||||.|||||.||.|||.|..|.||.||.|||..|||||||||||..
BPUM_0270___o 44 TATCTAAAATTTTCGGTAAAAATGCTAAAAAAGCATCTCAAATGCTTGAA 93
BSNT_00528___ 94 AACGGAAAGACAAAAAAAGAGATCCTGAAAGCAACCGGATCAACCGTTGG 143
||.||.||.|||||||.|||||||||.||||..|||||..||||.|||||
BPUM_0270___o 94 AAAGGGAAAACAAAAAGAGAGATCCTAAAAGAGACCGGCGCAACAGTTGG 143
BSNT_00528___ 144 GGTTAATCAGGCAGATTTTGAAGTATATGATGGTGAGATATTTGTCATCA 193
.||.||||..|||.|||||||.||.|||||.||.||||||||||||||||
BPUM_0270___o 144 TGTCAATCGAGCAAATTTTGATGTGTATGACGGCGAGATATTTGTCATCA 193
BSNT_00528___ 194 TGGGTCTATCAGGGAGCGGTAAATCAACTTTAGTACGGATGTTAAACCGG 243
||||.||||||||||||||.||.||.||..|.||.|||.||.||||..||
BPUM_0270___o 194 TGGGGCTATCAGGGAGCGGAAAGTCCACACTTGTGCGGCTGCTAAATAGG 243
BSNT_00528___ 244 CTTATTGAACCGACTGCCG--GAAATATTTACATTGATGGTGACATGATA 291
.|.||.|||||.||..||| |||||| ||.||||||||.||.||||||
BPUM_0270___o 244 TTAATCGAACCAACCTCCGGCGAAATA--TATATTGATGGGGATATGATA 291
BSNT_00528___ 292 ACAAATATGTCTAAAGACCAGCTCCGGGAAGTCCGCCGGAAGAAAATCAG 341
|||||||||||.||.||.||..|.||.|||||..|.||.||.||.|||||
BPUM_0270___o 292 ACAAATATGTCAAAGGATCAATTGCGTGAAGTTAGACGTAAAAAGATCAG 341
BSNT_00528___ 342 CATGGTCTTCCAAAAGTTCGCTCTGTTCCCGCACAGAACGATACTTGAAA 391
|||||||||||||||.|||||..|||||||||||.|.||.||.|||||||
BPUM_0270___o 342 CATGGTCTTCCAAAACTTCGCATTGTTCCCGCACCGCACCATTCTTGAAA 391
BSNT_00528___ 392 ACACAGAATACGGACTGGAACTTCAAGGTGTAGACAAACAAGAGCGGCAG 441
|||||||.||.||.||.|||.|.|||||||||||||||.|||||| ||.|
BPUM_0270___o 392 ACACAGAGTATGGTCTTGAATTACAAGGTGTAGACAAAGAAGAGC-GCCG 440
BSNT_00528___ 442 C-AAAAAGCGCTTGAGTCTCTTAAGCTCGTCGGGCTCGAAGGATTTGAAC 490
| .||||||||||||.|||.|.||.||.||.||.||.|||||.||||||.
BPUM_0270___o 441 CTCAAAAGCGCTTGAATCTTTAAAACTTGTTGGACTAGAAGGCTTTGAAG 490
BSNT_00528___ 491 ACCAATATCCAGATCAGCTTTCCGGCGGGATGCAGCAGCGTGTCGGCCTT 540
|.|||||||||.|.||..|....||.|||||||||||||||||.||..|.
BPUM_0270___o 491 AGCAATATCCAAACCAATTAAGTGGTGGGATGCAGCAGCGTGTTGGATTG 540
BSNT_00528___ 541 GCCCGCGCGTTGACAAATGATCCGGACATCCTTCTGATGGACGAAGCGTT 590
||.||.||.||..|||||||.||.||||||.|..|.|||||.|||||.||
BPUM_0270___o 541 GCACGTGCATTAGCAAATGACCCTGACATCTTATTAATGGATGAAGCATT 590
BSNT_00528___ 591 CAGTGCGCTTGATCCACTGATTCGTAAAGATATGCAGGATGAGCTTCTTG 640
|||.||.||.||||||.|.|||||||||||.|||||||||||..|.||||
BPUM_0270___o 591 CAGCGCACTCGATCCATTAATTCGTAAAGACATGCAGGATGAATTGCTTG 640
BSNT_00528___ 641 ATCTTCACGATA---ATGTCGGAAAAACAATTATCTTTATTACGCATGAC 687
|.|||| ||| .|||.||.|||||.||.||.||.|||||.|||||.
BPUM_0270___o 641 AGCTTC---ATACATCTGTAGGGAAAACGATCATTTTCATTACCCATGAT 687
BSNT_00528___ 688 TTGGACGAAGCGTTGCGGATCGGCGACAGAATTGTCCTAATGAAGGACGG 737
||.||.||.|||.|.||.||.||||||.|.|||||.||.|||||||||||
BPUM_0270___o 688 TTAGATGAGGCGCTTCGTATTGGCGACCGTATTGTGCTCATGAAGGACGG 737
BSNT_00528___ 738 CAACATCGTTCAAATCGGCACGCCTGAAGAAATCCTGATGAATCCATCTA 787
.||.||||||||.|||||.||.||.||||||||..|||||||.|||||.|
BPUM_0270___o 738 GAATATCGTTCAGATCGGAACACCAGAAGAAATATTGATGAACCCATCGA 787
BSNT_00528___ 788 ACGAATATGTTGAGAAATTCGTCGAAGATGTTGATTTGTCTAAAGTCCTC 837
|.|||||||||||....|||||.|||||||||||..|.||||||||..|.
BPUM_0270___o 788 ATGAATATGTTGAACGTTTCGTTGAAGATGTTGACCTTTCTAAAGTATTA 837
BSNT_00528___ 838 ACAGCAGGCCACATTATGAAACGCGCTGAAACAGTGCGGATTGATAAAGG 887
||.||.||.||.|||||||||||.||.||||||.|.|.|||.||.|||||
BPUM_0270___o 838 ACCGCTGGTCATATTATGAAACGTGCAGAAACAATTCAGATCGACAAAGG 887
BSNT_00528___ 888 GCCTCGCGTAGCATTGACACTGATGAAAAACCTTGGAATTTCTTCAATTT 937
|.||||.||.||..|.||.||.||||||||||||||.|||||.|||||.|
BPUM_0270___o 888 GGCTCGTGTTGCGCTTACGCTCATGAAAAACCTTGGGATTTCGTCAATCT 937
BSNT_00528___ 938 ATGCAGTGGATAAACAAAAGAAATTGTTAGGTGTTATCTATGCGTCTGAT 987
|||||||.|||||..|||||.|.||.|||||||||||.|.|||....|..
BPUM_0270___o 938 ATGCAGTCGATAAGAAAAAGCATTTATTAGGTGTTATTTCTGCACAAGCA 987
BSNT_00528___ 988 GCGAAAAAAGCGGCTGAGTCTGATTTGTCACTTCAAGACA----TCTTGA 1033
||||||||.|||||.||..|..||..|||.|| |||.| |||||
BPUM_0270___o 988 GCGAAAAAGGCGGCAGAAACGAATACGTCGCT---AGAAACTGTTCTTG- 1033
BSNT_00528___ 1034 ATACAGAATTTACGACTGTACCAGAGAATACGTATCTGACTGAGATTTTT 1083
|||.|||||||||.||.|||...||...|||||||.||||.||.||.|||
BPUM_0270___o 1034 ATAAAGAATTTACAACCGTATTGGAATCTACGTATTTGACAGAAATCTTT 1083
BSNT_00528___ 1084 GACGTTGTGTCTGATGCGAATATTCCAATTGCGGTTGTGGATGAGAAGCA 1133
||.|..||||||||||||||.|||||.|||||.|||||.||||||||..|
BPUM_0270___o 1084 GATGCAGTGTCTGATGCGAACATTCCGATTGCCGTTGTTGATGAGAAAAA 1133
BSNT_00528___ 1134 AAGAATGAAAGGAATTGTCGTAAGAGGCGCGCTGATTGGCGCACTTGCCG 1183
.||||||||.||.|||||.||.|||||.||..|.|||||.||..|..|.|
BPUM_0270___o 1134 CAGAATGAAGGGCATTGTGGTCAGAGGTGCATTAATTGGTGCGTTATCAG 1183
BSNT_00528___ 1184 GCAATAACGAGTATATCA--------------ATGCTGAAGGCACTAAAG 1219
|.|||.|.|||||||||| |.|||..|||.|.|.|
BPUM_0270___o 1184 GTAATGATGAGTATATCAACATGTCTTCTAACAAGCTTGAGGAAATTA-- 1231
BSNT_00528___ 1220 AACAAACACAAGATCCTTCTGCACAGGAGGT-GAAGTAA 1257
||||||||||.||||||||||||||||| ||| |||
BPUM_0270___o 1232 ---AAACACAAGAGCCTTCTGCACAGGAGGTAGAA-TAA 1266
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.