Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00515 and BPUM_0262
See
Amino acid alignment /
Visit
BSNT_00515 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:20
# Commandline: needle
# -asequence dna-align/BSNT_00515___yceE.1.24716.seq
# -bsequence dna-align/BPUM_0262___yceE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00515___yceE-BPUM_0262___yceE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00515___yceE-BPUM_0262___yceE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00515___yceE
# 2: BPUM_0262___yceE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 601
# Identity: 445/601 (74.0%)
# Similarity: 445/601 (74.0%)
# Gaps: 44/601 ( 7.3%)
# Score: 1669.5
#
#
#=======================================
BSNT_00515___ 1 ATGGCCATTCAATTATCAAAAGGACAGCGCATTGATTTAACAAAAACAAA 50
|||||.|||||..|||||||||||||.||..|.||||||||||||||.||
BPUM_0262___y 1 ATGGCGATTCAGCTATCAAAAGGACAACGTGTCGATTTAACAAAAACCAA 50
BSNT_00515___ 51 TCCGGGACTGACAAAAGCGGTGATCGG-CTTAGGCTGGGATACAAACAAG 99
.||.||||||||.||||.|.||||||| ||| ||.||||||||.||.||.
BPUM_0262___y 51 CCCAGGACTGACGAAAGTGATGATCGGTCTT-GGGTGGGATACGAATAAA 99
BSNT_00515___ 100 TACTCCGGCGGACACGATTTTGACCTGGATGCTTCGGCCTTTTTAGTTGA 149
||.||.||.|||..|||.|||||..||||.|||||.||.||.|||||.||
BPUM_0262___y 100 TATTCAGGTGGAGCCGAATTTGATTTGGACGCTTCAGCATTCTTAGTGGA 149
BSNT_00515___ 150 TGCGCATGATAACTGCGTAAATGATC----TC-----------GATTTCG 184
||| |||..||| || ||.||.|
BPUM_0262___y 150 TGC---------------AAACAATCGTTGTCAGCAAGACACAGACTTTG 184
BSNT_00515___ 185 TCTTCTATAATAACCTTGAACATCCGAGCGGCGGTGTCATCCATACGGGT 234
|.|||||||||||||||.|.|||||.||||||.||||.|..|||||.|||
BPUM_0262___y 185 TTTTCTATAATAACCTTCAGCATCCAAGCGGCAGTGTGACTCATACAGGT 234
BSNT_00515___ 235 GACAACCGCACGGGTGAGGGCGACGGAGATGATGAGCAGATTATCGTTGA 284
||.|||||.||||||||.||.||.||||||||.|||||.|||.|||||||
BPUM_0262___y 235 GATAACCGGACGGGTGAAGGAGATGGAGATGACGAGCAAATTCTCGTTGA 284
BSNT_00515___ 285 TTTCTCAAAAATCCCTGCTCACATTGAGAAAATCGGCATCACAGTGACCA 334
||||||||||||.||||||.|||||||....|||||.||.|||||.||.|
BPUM_0262___y 285 TTTCTCAAAAATTCCTGCTAACATTGATCGTATCGGAATTACAGTAACGA 334
BSNT_00515___ 335 TTCACGACGCTGAAGCACGCAGCCAAAACTTTGGACAAGTTTCCAATGCA 384
||||.||.||.||.||.||||||||.||.|||||||||||.||.|||||.
BPUM_0262___y 335 TTCATGATGCAGAGGCGCGCAGCCAGAATTTTGGACAAGTCTCAAATGCG 384
BSNT_00515___ 385 TTTGTCCGCGTTGTGGATGAAGAAACGC-----AGAA-TGAGCTTCTTCG 428
|||||.||.|||||...||||| |..|| |||| ||| ||||
BPUM_0262___y 385 TTTGTTCGTGTTGTAAGTGAAG-AGGGCGGGGAAGAATTGA-----TTCG 428
BSNT_00515___ 429 CTTCGATTTGGGAGAAGACTTCTCCATTGAAACAGCTGTTGTCGTTTGTG 478
|||.|||||.||.|||||||||||.||.||||||||||||||.||.||||
BPUM_0262___y 429 CTTTGATTTAGGGGAAGACTTCTCAATCGAAACAGCTGTTGTGGTATGTG 478
BSNT_00515___ 479 AGCTTTACAGACACGGCGGCGAGTGGAAATTCAATGCGATCGGCAGCGGA 528
|.||.|||.|.|||||..||||.|||||.||.||.||||||||.||||||
BPUM_0262___y 479 AACTATACCGCCACGGAAGCGATTGGAAGTTTAACGCGATCGGAAGCGGA 528
BSNT_00515___ 529 TTTTCCGGCGGGCTGGCTGCATTGTGCCGGAATTACGGTTTGCAAGTGTA 578
||.||.|||||.||.||.||..|.||.|..|||||.||.||..||||.||
BPUM_0262___y 529 TTCTCTGGCGGACTTGCAGCTCTTTGTCAAAATTATGGGTTAGAAGTATA 578
BSNT_00515___ 579 A 579
|
BPUM_0262___y 579 A 579
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.