Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00461 and BPUM_0256

See Amino acid alignment / Visit BSNT_00461 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:18
# Commandline: needle
#    -asequence dna-align/BSNT_00461___cwlJ.1.24716.seq
#    -bsequence dna-align/BPUM_0256___cwlJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00461___cwlJ-BPUM_0256___cwlJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00461___cwlJ-BPUM_0256___cwlJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00461___cwlJ
# 2: BPUM_0256___cwlJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 433
# Identity:     321/433 (74.1%)
# Similarity:   321/433 (74.1%)
# Gaps:           8/433 ( 1.8%)
# Score: 1137.5
# 
#
#=======================================

BSNT_00461___      1 ATGGCGGTCGTGAGAGCAACGAGTGCGGATGTCGATTTGATGGCAAGGCT     50
                     |||||.||.||||||||.||.||..|.|||.|.|||.|.|||||.||.||
BPUM_0256___c      1 ATGGCAGTGGTGAGAGCGACAAGCTCTGATATTGATCTTATGGCCAGACT     50

BSNT_00461___     51 GCTCAGAGCGGAAGCGGAAGGCGAAGGCAAGCAGGGGATGCTGCTTGTCG    100
                     |||.|||||.||.||.|||||.|||||.|||||.|||||||||||.||.|
BPUM_0256___c     51 GCTGAGAGCAGAGGCAGAAGGTGAAGGGAAGCAAGGGATGCTGCTCGTAG    100

BSNT_00461___    101 GCAACGTTGGAATTAATCGGCTGCGGGCGAATTGCTCAGATTTTAAAGGC    150
                     |.||.||.||.||.||.|||.||||.||.||.|||||.||.||||||||.
BPUM_0256___c    101 GAAATGTGGGCATCAACCGGTTGCGTGCCAACTGCTCTGACTTTAAAGGG    150

BSNT_00461___    151 CTCCGCACCAT--CAGGCAGATGATTTATCAGCCACACGCGTTTGAGGCT    198
                     ||.||.||.||  ||  ||.|||||||||||....||.||.|||||.||.
BPUM_0256___c    151 CTGCGTACGATTCCA--CAAATGATTTATCAAGAGCATGCATTTGAAGCA    198

BSNT_00461___    199 GTGACTCATGGATATTTTTATCAAAGGGCGCGAGATAGCGAGCGTGCCCT    248
                     ||.||.||.||.||||||||||||.|.||.|||||.|..||.....|.||
BPUM_0256___c    199 GTCACGCACGGTTATTTTTATCAACGAGCACGAGAAACGGAAAAAACACT    248

BSNT_00461___    249 TGCACGCCGGTCGATTAATGGTGAAAGGCGCTGGCCTGCAAAATTTAGTT    298
                     |||.||..||...|||||.||.|||.|....|||||.||||||||.||..
BPUM_0256___c    249 TGCGCGGAGGAATATTAACGGAGAACGATTTTGGCCAGCAAAATTCAGCC    298

BSNT_00461___    299 TATGGTACTTCAGGCCGCAGGGGGACTGTCCAGCC--CAGTGGTATAACC    346
                     |.|||||.||.|..||||..||..|.|||||| ||  || |||||.||.|
BPUM_0256___c    299 TTTGGTATTTTAAACCGCCTGGTAATTGTCCA-CCGACA-TGGTACAATC    346

BSNT_00461___    347 AGCCGTTTGTGGCCAGATTTAAGTCACACTGCTTTTATCAGCCGACGGCG    396
                     |||||||||||||.||.|.||||||.||.||||||||||||||.||.||.
BPUM_0256___c    347 AGCCGTTTGTGGCAAGGTATAAGTCGCATTGCTTTTATCAGCCAACTGCT    396

BSNT_00461___    397 GAGACGTGTGAAAATGTATATAACACATTTTAG    429
                     ||.||.|||||||||||.||||||||.||||||
BPUM_0256___c    397 GAAACATGTGAAAATGTCTATAACACTTTTTAG    429


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