Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00374 and BPUM_0206
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:16
# Commandline: needle
# -asequence dna-align/BSNT_00374___ybeC.1.24716.seq
# -bsequence dna-align/BPUM_0206___ybeC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00374___ybeC-BPUM_0206___ybeC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00374___ybeC-BPUM_0206___ybeC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00374___ybeC
# 2: BPUM_0206___ybeC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1652
# Identity: 1239/1652 (75.0%)
# Similarity: 1239/1652 (75.0%)
# Gaps: 46/1652 ( 2.8%)
# Score: 4561.0
#
#
#=======================================
BSNT_00374___ 1 ATGAAAGGTGTTTACGATATGAATCAATTGCATCGAAGAATGGGAACGTT 50
||||||||.||.|||||.||||||||||| |
BPUM_0206___y 1 ------------------ATGAATCATTTACATCGTAGAATGGGAAC--T 30
BSNT_00374___ 51 TTCCC--TCATGATGGTCGGGCTCGGGTCGATGATCGGTTCAGGCTGGCT 98
|||.| |.||||||||.||.||.||.||.||.||.||||||||.|||||
BPUM_0206___y 31 TTCGCTTTAATGATGGTAGGTCTTGGCTCAATCATTGGTTCAGGATGGCT 80
BSNT_00374___ 99 GTTCGGGGCTTGGCGTGCTGCTCAAATAGCAGGACCAGCTGCTATTATTT 148
.|||||.|||||||||||.||||||||.||.||.||.||.||||||.|.|
BPUM_0206___y 81 ATTCGGTGCTTGGCGTGCCGCTCAAATTGCCGGCCCTGCGGCTATTTTAT 130
BSNT_00374___ 149 CATGGGTTATTGGAATGGTCGTCATTTTATTTATTGCTCTTTCTTATAGT 198
|.|||.|.|||||.|||||.||.|||||||||||.|||.|.|||||||||
BPUM_0206___y 131 CCTGGTTGATTGGGATGGTTGTGATTTTATTTATCGCTTTGTCTTATAGT 180
BSNT_00374___ 199 GAACTAGGTTCTATGTTCCCTGAAGCGGGGGGAATGGTAAAATATACGCA 248
|||||.||.||.|||||.||.||.||.||.||||||||.|||||||||||
BPUM_0206___y 181 GAACTCGGATCGATGTTTCCAGAGGCAGGCGGAATGGTGAAATATACGCA 230
BSNT_00374___ 249 ATATTCACACGGTTCGTTTATCGGTTTTATTGCGGGCTGGGCCAACTGGA 298
|||||||||||..||.|||||.||.||||||||||..|||||.|||||||
BPUM_0206___y 231 ATATTCACACGACTCTTTTATAGGATTTATTGCGGCTTGGGCAAACTGGA 280
BSNT_00374___ 299 TTGCGATTGTGTCCGTCATTCCGGTTGAAGCGGTGGCCTCCGTTCAATAT 348
|.||.|||||.|||||||||||||||||.||||||||.||.||.||.|||
BPUM_0206___y 281 TCGCTATTGTCTCCGTCATTCCGGTTGAGGCGGTGGCTTCTGTCCAGTAT 330
BSNT_00374___ 349 ATGAGTTCTTGGCCATGGGAATGGGCGAAATGGACAAGCGGTTTGGTGAA 398
||||||||||||||.|||||||||||.||.|||||||.|..||||||.|.
BPUM_0206___y 331 ATGAGTTCTTGGCCTTGGGAATGGGCAAAGTGGACAACCCATTTGGTCAC 380
BSNT_00374___ 399 GAATGGAACGCTGACTGGGGAAGGGCTAGCAT--TTGCCTCTGTATTACT 446
.||.||...|.||||....|||||.|| ||| |.|||..|||..|.||
BPUM_0206___y 381 AAAAGGGGTGTTGACGACAGAAGGACT--CATGGTCGCCAGTGTGCTGCT 428
BSNT_00374___ 447 TCTCATTTATTTTCTGCTGAACTATTGGACAGTCA--ATCTATTTTCGAA 494
|.|.|||||.|||||.||.||.||.|||||||| | || |||||||.||
BPUM_0206___y 429 TGTGATTTACTTTCTACTTAATTACTGGACAGT-AGGAT-TATTTTCAAA 476
BSNT_00374___ 495 AGCGAATTCATTAATTACGATTTTTAAAATTATTATTCC-GGGTCTTACG 543
|||||||.||||.|||||..|.|||||||||.|.||||| |||| |.||.
BPUM_0206___y 477 AGCGAATACATTCATTACTGTGTTTAAAATTGTCATTCCAGGGT-TAACC 525
BSNT_00374___ 544 ATTGGAGCTTTGCTGTTTGTCGGATTCCACGGAGAAAACTTTACTGGCGG 593
|||||.||..|..|.||.||.||.||.||..|.||.||.||||||...||
BPUM_0206___y 526 ATTGGTGCGCTCTTATTCGTAGGTTTTCATAGTGAGAATTTTACTTCTGG 575
BSNT_00374___ 594 TCAAAGCATTGCGCCGAATGGCTGGGCAAGTGTGCTGACGGCGGTTGCCA 643
...|||.|||||.||.||.||||||||.|||||||||||.||.|||||.|
BPUM_0206___y 576 AACAAGTATTGCTCCTAACGGCTGGGCGAGTGTGCTGACAGCTGTTGCGA 625
BSNT_00374___ 644 CTTCCGGTATCGTTTTTGCGTTTAACGGTTTCCAAAGCCCGATTAATATG 693
|.||.||.||.||.|||||.||.||.||.|||||||||||||||||||||
BPUM_0206___y 626 CATCAGGAATTGTGTTTGCCTTCAATGGCTTCCAAAGCCCGATTAATATG 675
BSNT_00374___ 694 GCGGGTGAAGCAAAAAATCCGGGGAAATCAATTCCGATTGCGGTTGTTGG 743
||||||||.||.||||||||.|||..|||.||||||||||||.|||||||
BPUM_0206___y 676 GCGGGTGAGGCGAAAAATCCAGGGCGATCCATTCCGATTGCGATTGTTGG 725
BSNT_00374___ 744 CTCTCTTTTCGTTGCGACAGTGATTTATGTCCTGCTGCAGATCGCCTTCA 793
.||..||||..|||.|||.||.||||||||.||..|.||.||..||||.|
BPUM_0206___y 726 ATCCATTTTGATTGGGACTGTTATTTATGTACTTTTACAAATTTCCTTTA 775
BSNT_00374___ 794 TTGGAGCTGTGAATCCTTC--TGATATTGCTCACGGCTGGAGCCATCTGA 841
|.||.|||||..||||.|| || ||||...|.||.|||.|||||.|||
BPUM_0206___y 776 TCGGTGCTGTCGATCCATCCATG--ATTGTGAATGGATGGGGCCATTTGA 823
BSNT_00374___ 842 ATTTTAATTCTCCTTTTGCTGATCTGGCGATTGCGCTGAATATTAACTGG 891
|||||||.||.||.||||||||.||.||.||||||||....|||||||||
BPUM_0206___y 824 ATTTTAACTCACCATTTGCTGACCTTGCCATTGCGCTTGGGATTAACTGG 873
BSNT_00374___ 892 CTAGTTATTGTGTTATATGCGGATGCATTTGTATCACCGTCTGGAACGGG 941
||.|||.|..|.||||||||.|||||.||||||||.||.|||||.||.||
BPUM_0206___y 874 CTGGTTCTGATTTTATATGCAGATGCGTTTGTATCCCCTTCTGGTACAGG 923
BSNT_00374___ 942 GATTACGTATACGGCGACAACGTCCCGAATGATTTACGGAATGGAAAAAA 991
.||.||||||||.|||||.|||||.||.||||||||.|||||||||||||
BPUM_0206___y 924 AATAACGTATACAGCGACGACGTCTCGCATGATTTATGGAATGGAAAAAA 973
BSNT_00374___ 992 ACAAATACATGCCGAGTATATTCGGGAAGCTTCATCCGATTTACGGCGTT 1041
|.||.||.|||||.|||.||.|.||....||.||.||.|||||.|||||.
BPUM_0206___y 974 ATAAGTATATGCCAAGTGTACTTGGTCGTCTGCACCCTATTTATGGCGTG 1023
BSNT_00374___ 1042 CCGCGACAAGCAATGTTCTTTAACTTGATTGTGTCGTTCATCTTTTTGTT 1091
||.||.|.|||.|||||.||||||||...|||.|||||.||||||.||||
BPUM_0206___y 1024 CCTCGTCCAGCGATGTTTTTTAACTTAGCTGTCTCGTTTATCTTTCTGTT 1073
BSNT_00374___ 1092 CCTGTTCAGAGGGTGGGGCGTATTAGCGGAAATTATTTCTGTTGCTACGT 1141
..|.||.|||||.|||||.|||.||||||||||.||.||.|||||.||..
BPUM_0206___y 1074 TTTATTTAGAGGCTGGGGTGTACTAGCGGAAATCATATCAGTTGCGACAC 1123
BSNT_00374___ 1142 TAATTTCTTATATCACCGGCCCGATCACAGTCATGACATTGAGACGGACG 1191
|.|||||||||.|.||.||.||..|.||.||||||||..|||||..|||.
BPUM_0206___y 1124 TTATTTCTTATCTGACAGGACCAGTAACGGTCATGACGCTGAGAAAGACA 1173
BSNT_00374___ 1192 GGGAAAGACCTGTACAGGCCTCTTCGTTTAAAAGGTTTAAACGTGATTGC 1241
||||.|||..|.||..|.||.|||||..|||||||..|.|.|.|.||.||
BPUM_0206___y 1174 GGGACAGATTTATATCGTCCGCTTCGAATAAAAGGACTCAGCATCATCGC 1223
BSNT_00374___ 1242 GCCGCTTGGATTTATCTTTGCGTCACTGGTGCTGTATTGGGCGCGCTGGC 1291
.||.||.||.|||.|||||||||||.||..|||.|||||||||.|.||||
BPUM_0206___y 1224 TCCTCTCGGTTTTGTCTTTGCGTCATTGACGCTTTATTGGGCGAGATGGC 1273
BSNT_00374___ 1292 CGTTAACAGGGCAGGTTCTGTTTATTATCCTGATCGGTCTTCCCATTTAT 1341
||||||||||.|||||.||.||.|||||.||.|||||||||||.||.|||
BPUM_0206___y 1274 CGTTAACAGGTCAGGTGCTATTCATTATTCTCATCGGTCTTCCGATCTAT 1323
BSNT_00374___ 1342 TTCTATTATCAGGCGAAGGCGAAATGGAAAGGGTTTGGCCGAAACTTCAA 1391
||.||.|||||.||.||..||||.||||||||.||.|||||.||..||||
BPUM_0206___y 1324 TTTTACTATCAAGCAAAATCGAAGTGGAAAGGCTTCGGCCGTAATGTCAA 1373
BSNT_00374___ 1392 AGCCGGCGTTTGGATGATGTTTTATCTGCTGGCCATGATGGTCATTTCTT 1441
|||.||.|.|||||||.|..|.||..|.||.|..||||||..||||||.|
BPUM_0206___y 1374 AGCGGGTGCTTGGATGGTCGTATACTTACTTGTGATGATGACCATTTCCT 1423
BSNT_00374___ 1442 ATTTGGGCAGTGATAAATTCGGCGGCCTGAATGTCATTCATTATGGCTGG 1491
...|.||.|||||.||.||||||||....|||||||||||||||||.|||
BPUM_0206___y 1424 GCCTTGGTAGTGACAAGTTCGGCGGTTATAATGTCATTCATTATGGTTGG 1473
BSNT_00374___ 1492 GATATGGTTCTGATTGCGATGGTATCACTTG-TATTCTATGTGTGGGCGC 1540
|||||||.|||.|||.|..||||.|| |||| |.||.|||.|||||||.|
BPUM_0206___y 1474 GATATGGCTCTTATTACAGTGGTTTC-CTTGCTGTTTTATATGTGGGCAC 1522
BSNT_00374___ 1541 TGAAGAGCGGCTACCAGACAGAATACTTAAAGGATGCGAAAGAGATCAAT 1590
|.||.||.||.|...|.|||||||...||.|||||||||||.|.||||||
BPUM_0206___y 1523 TCAAAAGTGGATTTGAAACAGAATTTCTAGAGGATGCGAAAAAAATCAAT 1572
BSNT_00374___ 1591 TCTCAGCTG----CTTAATGGACAGTCAGAAGCTGCTGCCGGAAAAGAAT 1636
..|.||||| |||..|.| || ||||||.||..|....|||||||
BPUM_0206___y 1573 GATGAGCTGCGCACTTCTTCG-CA---AGAAGCCGCATCATCTAAAGAAT 1618
BSNT_00374___ 1637 AA 1638
||
BPUM_0206___y 1619 AA 1620
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