Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00378 and BPUM_0182
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:16
# Commandline: needle
# -asequence dna-align/BSNT_00378___glpT.1.24716.seq
# -bsequence dna-align/BPUM_0182___glpT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00378___glpT-BPUM_0182___glpT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00378___glpT-BPUM_0182___glpT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00378___glpT
# 2: BPUM_0182___glpT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1346
# Identity: 1019/1346 (75.7%)
# Similarity: 1019/1346 (75.7%)
# Gaps: 25/1346 ( 1.9%)
# Score: 3734.0
#
#
#=======================================
BSNT_00378___ 1 ATGCTTAATAT-ATTTAAACCGGCTCCTCATATTGAGAGACTGGATGATT 49
||| ||.|.|| .||||||||.|||||.|||||.||.||.||.||||||.
BPUM_0182___g 1 ATG-TTCAAATGGTTTAAACCCGCTCCGCATATCGACAGGCTCGATGATG 49
BSNT_00378___ 50 CAAAGATGGATGCGGCAT---ACAAACGGCTCAGACTGCAAGTATTCATT 96
|.||.|..||||.|.|.| |.||||.|| |.||||||||.||..|.
BPUM_0182___g 50 CCAAAACAGATGAGACCTATAAGAAACTGC---GGCTGCAAGTCTTTTTA 96
BSNT_00378___ 97 GGTATTTTCATTGGCTACGCAGGCTACTACCTGCTACGGAAAAACTTTGC 146
||.||.||.||.||.||.||.|||||.||..||||.||||||||.||.||
BPUM_0182___g 97 GGCATCTTTATCGGGTATGCTGGCTATTATTTGCTGCGGAAAAATTTCGC 146
BSNT_00378___ 147 CTTTGCCATTCCTTATCTGCAGGAACAGGGATTTTCGAAAACAGAACTGG 196
.|||||.|||||.|||||.||.|||.|.||.||..||||||..|||.|.|
BPUM_0182___g 147 TTTTGCTATTCCATATCTACAAGAAGAAGGGTTCACGAAAAGTGAATTAG 196
BSNT_00378___ 197 GTTTGGTGCTGGCCGCTGTGTCCATTGCGTACGGCTTCAGCAAATTCATC 246
|.||.||.||.||.|||||.|||||.||.||.|||||.||.|||||||||
BPUM_0182___g 197 GCTTTGTACTCGCGGCTGTCTCCATCGCTTATGGCTTTAGTAAATTCATC 246
BSNT_00378___ 247 ATGGGGATGGTGTCTGACCGCTGTAATCCGAGATATTTTCTGGCGACAGG 296
|||||||||.|.||.||||||||||||||.|||||||||.|.||.||.||
BPUM_0182___g 247 ATGGGGATGATCTCAGACCGCTGTAATCCAAGATATTTTTTAGCCACCGG 296
BSNT_00378___ 297 CCTATTTTTATCAGCAATCGTTAATATTCTATTCGTTTCAATGCCTTGGG 346
.||.|||||||||||..|..|.|||||.|||||.||.|||.|.||.||||
BPUM_0182___g 297 ACTCTTTTTATCAGCCCTTATCAATATCCTATTTGTCTCATTTCCATGGG 346
BSNT_00378___ 347 TGACTTCGAGCGTCACCATCATGTTTATTTTTATGTTTATCAACGGATGG 396
||||.||.||.||....||||||||..|.||.||||||.|.|||||.|||
BPUM_0182___g 347 TGACGTCAAGTGTATGGATCATGTTCTTATTCATGTTTTTAAACGGCTGG 396
BSNT_00378___ 397 TTTCAAGGAATGGGCTGGCCGCCATGCGGCAGGACAATGGCCCATTGGTT 446
||.|||||.|||||.|||||||||||.||..||||.|||||.||||||||
BPUM_0182___g 397 TTCCAAGGCATGGGGTGGCCGCCATGTGGACGGACGATGGCGCATTGGTT 446
BSNT_00378___ 447 CTCCATAAGTGAACGCGGCACAAAAATGTCGATCTGGAATGTCGCCCATA 496
.||..|.||||||||.||.||.||||||||.||.|||||.|||||.||.|
BPUM_0182___g 447 TTCGGTTAGTGAACGTGGAACGAAAATGTCCATTTGGAACGTCGCTCACA 496
BSNT_00378___ 497 ACATAGGCGGCGGTATTCTTGCTCCGCTTGTCACTCTT-GGGATCGCGAT 545
|.||.|||||.||.||||||||.||.||..|||| ||| ||.||||...|
BPUM_0182___g 497 ATATCGGCGGGGGAATTCTTGCACCACTCATCAC-CTTAGGAATCGTACT 545
BSNT_00378___ 546 GTTCGTCACTTGGAAAAGCGTGTTTTTCTTCCCTGCCATCATCGCCATTA 595
|||.|..||.||||||||..|.||.|||||||||||||||||.|||||||
BPUM_0182___g 546 GTTTGCAACATGGAAAAGTATCTTCTTCTTCCCTGCCATCATTGCCATTA 595
BSNT_00378___ 596 TCATTTCATTTTTAATTGTTTTATTGGTTCGTGATACGCCTCAATC--CT 643
||.|.||.||..|.||..||.|..|.||.||.|||||.||.||||| ||
BPUM_0182___g 596 TCGTCTCCTTCGTGATCATTCTTCTCGTCCGAGATACACCGCAATCTACT 645
BSNT_00378___ 644 GCGGACTCCCGCCAATTGAAGAGTATCGGAATGACTATCCAAAACACGC- 692
||.||.||||||||.||.||.|||||.|||||||||||...||| ||
BPUM_0182___g 646 --GGTCTTCCGCCAATCGAGGAATATCGCAATGACTATCCGGCACA-GCA 692
BSNT_00378___ 693 TTTTAAAAATCAGGAAAAAGAATTAACAACAAAAGAAATTCTT-TTTCAA 741
.|.|.||.||||.|||||||||||||||...|||||.| |||| |||.|.
BPUM_0182___g 693 GTATGAAGATCAAGAAAAAGAATTAACAGTGAAAGAGA-TCTTATTTAAG 741
BSNT_00378___ 742 TATGTGCTGAACAACAAATTTCTTTGGTACATCGCTTTTGCCAATGTATT 791
||||||||.|||||.|||||.||||||||.|||||..|||||||.||.||
BPUM_0182___g 742 TATGTGCTCAACAATAAATTCCTTTGGTATATCGCCATTGCCAACGTCTT 791
BSNT_00378___ 792 TGTTTATTTCGTGCGATACGGCGTGGTTGACTGGGCGCCTACTTACTTAA 841
|||.||.|||||.||.|||||.||.||.|||||||||||.||.|||||||
BPUM_0182___g 792 TGTGTACTTCGTCCGTTACGGTGTCGTAGACTGGGCGCCGACCTACTTAA 841
BSNT_00378___ 842 CAGAAGCCAAAGGCTTTTCTCCTGAAGACTCGCGCTGGTCGTATTTTCTT 891
|||||||.|||||||||||.||.||..|.||.||||||||.|||||||||
BPUM_0182___g 842 CAGAAGCTAAAGGCTTTTCACCAGAGCATTCCCGCTGGTCATATTTTCTT 891
BSNT_00378___ 892 TACGAATACGCAGGCATACCGGGAACAATCTTGTGCGGCTGGATCAGTGA 941
||.|||||.||||||||.||.||.|||.|.||||||||.|||||.|||||
BPUM_0182___g 892 TATGAATATGCAGGCATTCCTGGCACATTATTGTGCGGGTGGATTAGTGA 941
BSNT_00378___ 942 CCGATTCTTCAAAAGCCGCCGGGCACCGGCAGGCGTTTTGTTTATGGCGG 991
|||||||||.|.|||||||||.|||||.||||||||..|.||||||||.|
BPUM_0182___g 942 CCGATTCTTTAGAAGCCGCCGCGCACCAGCAGGCGTCCTCTTTATGGCTG 991
BSNT_00378___ 992 GGG---NCATTGCCGTATTGGTGTACTGGCTGAATCCGGCCGGCAATCCG 1038
||| .|||||.||..|.||.||||||.|.||.||.||.||||||||.
BPUM_0182___g 992 GGGTGTTAATTGCGGTGCTTGTTTACTGGTTAAACCCTGCTGGCAATCCA 1041
BSNT_00378___ 1039 CTCGTAGACAATATCGCCTTAATCAGCATTGGTTTCTTAATCTACGGACC 1088
.|.||.||.||.||||||.|.||||||||.||.||.|||||.||||||||
BPUM_0182___g 1042 ATGGTCGATAACATCGCCCTTATCAGCATCGGCTTTTTAATTTACGGACC 1091
BSNT_00378___ 1089 TGTTATGCTGATCGGCCTGCAAGCGATCGATCTAGCACCGAAAAAAGCAG 1138
|||.|||||.||.||.||.|||||.||.||.||.||.||.||||||||.|
BPUM_0182___g 1092 TGTCATGCTCATTGGACTTCAAGCCATTGACCTCGCTCCTAAAAAAGCGG 1141
BSNT_00378___ 1139 CCGGAACTGCAGCCGGTTTGACCGGATTTTTCGGATACATCGGCGGATCC 1188
|.||.|||||.|||||..|.||.||.||||||||.||.||.|||||.||.
BPUM_0182___g 1142 CTGGCACTGCGGCCGGACTCACTGGCTTTTTCGGCTATATTGGCGGCTCT 1191
BSNT_00378___ 1189 GCCTTCGCAAACGCCATTATGGGCTTTGTCGTTGACCGCTTTA--ATTGG 1236
||||||||.||.||.||.||||||.|||||||.|| .|.||| |.|||
BPUM_0182___g 1192 GCCTTCGCCAATGCGATGATGGGCGTTGTCGTCGA--TCATTACGACTGG 1239
BSNT_00378___ 1237 AACGGCGGCTTTATCATGCTGATCTCTTCCTGCATTCTTGCCATCGTCTT 1286
|..||.||.|||||..|..||.|...|||.||..|.|||||.||.|||||
BPUM_0182___g 1240 ACAGGAGGATTTATTTTATTGGTTGGTTCTTGTGTGCTTGCGATTGTCTT 1289
BSNT_00378___ 1287 CTTGGCTTTGACATGGAATACAGGAAAACGGGCAGAGCATGTTTAA 1332
|.|.||..||||.||||||||||||||.||.|.||||||.|.||||
BPUM_0182___g 1290 CCTAGCGATGACTTGGAATACAGGAAAGCGAGTAGAGCAAGCTTAA 1335
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