Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00323 and BPUM_0158
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:15
# Commandline: needle
# -asequence dna-align/BSNT_00323___murQ.1.24716.seq
# -bsequence dna-align/BPUM_0158___murQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00323___murQ-BPUM_0158___murQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00323___murQ-BPUM_0158___murQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00323___murQ
# 2: BPUM_0158___murQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 953
# Identity: 671/953 (70.4%)
# Similarity: 671/953 (70.4%)
# Gaps: 79/953 ( 8.3%)
# Score: 2161.5
#
#
#=======================================
BSNT_00323___ 1 ATGTCAGAACCAT-TAAA---CCTTCACCGTCTCACAACGGAATCACGCA 46
||| ||| |||| |.|| |.||| |.|.|||||.||||||.|.|
BPUM_0158___m 1 ATG-CAG--CCATCTCAATTGCGTTC----TTTAACAACAGAATCAAGAA 43
BSNT_00323___ 47 ATAGCC--AAACAGTTGAAAT-CCACAAAGCAAACACTCTCGGCATCCTC 93
|| || |.|||.|.|.||| .||| |||||.|..|.||.|..||.|||
BPUM_0158___m 44 AT--CCTAACACAATGGGAATATCAC-AAGCAGATCCGCTTGAAATACTC 90
BSNT_00323___ 94 AAAATGATCAACAACGAAGATATGAAAGTCGCTGCAGCCGTTCAAGA--- 140
.|.|||||||||.|.|||||||||||.||||||..|||.|| ||
BPUM_0158___m 91 CAGATGATCAACGAAGAAGATATGAAGGTCGCTCAAGCAGT----GAACC 136
BSNT_00323___ 141 -GGTTCTCCCCGACA--TCAAAACAGC-TGTAGACTGCGCTTATGAAT-C 185
.||.||.|| ||| |||||||||| .|| ||||..||.|||||.| |
BPUM_0158___m 137 TTGTCCTACC--ACATGTCAAAACAGCAAGT-GACTTTGCCTATGATTCC 183
BSNT_00323___ 186 GTTTCAAAATGGAGGCCGGCTCATATATACAGGCGCCGGCACAAGTGGCA 235
.|||| ||||||.|||.|.|||||.|||..|||.|||||.||||||||||
BPUM_0158___m 184 ATTTC-AAATGGGGGCAGACTCATTTATTTAGGGGCCGGGACAAGTGGCA 232
BSNT_00323___ 236 GACTCGGCGTCATGGATGCTGTTGAATGTCCTCCCACCTACAGCGTAAGC 285
||||.||.||.|||||||||||.||||||||.||.|||||.||||| |
BPUM_0158___m 233 GACTAGGTGTGATGGATGCTGTCGAATGTCCCCCTACCTATAGCGT---C 279
BSNT_00323___ 286 CCAGCTCAGGTCA---TCGGAATCATGGC---TGGAGGCCCCGAAGCCTT 329
.||.||.|.||.| ||||.|||||||| .||||.|.|.| |||
BPUM_0158___m 280 TCACCTGATGTGATTGTCGGCATCATGGCAGGCGGAGACTCTG----CTT 325
BSNT_00323___ 330 TTT-ACAGGCAGCAGAGGGCATTGAAGACAGTGAAGAAGCAGG--AGCTG 376
||| |||.||.||.||.|...|.|||||||||||||||||.|| |.|
BPUM_0158___m 326 TTTCACATGCTGCCGAAGATGTGGAAGACAGTGAAGAAGCCGGCAAAC-- 373
BSNT_00323___ 377 AAGATTTAAGAAACATACAGCTCACTTCAAATGACACCGTCATTGCCATC 426
||||||||..|.||||.||.||.||.|||||.||.||.|||.|.|..|||
BPUM_0158___m 374 AAGATTTAGTACACATTCACCTGACATCAAAAGATACAGTCGTCGGTATC 423
BSNT_00323___ 427 GCAGCAAGCGGCCGCACACCCTACGCCGCAGGCGCCCTAAGATACGCCCG 476
||.||.||||||.|.|||||||||..|...||.||..|||..|||||
BPUM_0158___m 424 GCTGCCAGCGGCAGGACACCCTACATCATCGGTGCTTTAAACTACGC--- 470
BSNT_00323___ 477 CAAA---GTCGGAGCACACACCATCGCCCTTACTTGTAATG-------AA 516
.||| .||||.|||.|.||..|.|||||.|.|||||||| ||
BPUM_0158___m 471 TAAATCCATCGGCGCAAAAACAGTAGCCCTCAGTTGTAATGAACAATCAA 520
BSNT_00323___ 517 AATTCCGCCATCAGCAAGGATGCGGATCACAGCATTGAGGTTGTCGTCGG 566
||.||.||.|.|.|..||..|||| .||||||.||..|.||.||
BPUM_0158___m 521 AAATCAGCGAACTGGCAGACTGCG-------CCATTGAAGTCATTGTAGG 563
BSNT_00323___ 567 ACCTGAGGCCATTACAGGATCAACACGTATGAAAGCCGCAACCGCTCATA 616
|||.||.||||||||.||.||||||||.||||||||||||.|||||||||
BPUM_0158___m 564 ACCAGAAGCCATTACTGGGTCAACACGAATGAAAGCCGCATCCGCTCATA 613
BSNT_00323___ 617 AAATGATTCTAAACATGATATCTACCGCTGTAATGGTCAAAATCGGCAAG 666
||||||||.||||.|||.|.||.|||.||||.|||.|||.|...||.||.
BPUM_0158___m 614 AAATGATTTTAAATATGCTTTCCACCTCTGTCATGATCAGACAAGGAAAA 663
BSNT_00323___ 667 GTTTACGAAAACTTGATGGTAGACGTCAACGTCAGCAACAAAAAACTAAA 716
||.||.||||||||||||||.||.||.||.||||||||..|.|||.||||
BPUM_0158___m 664 GTATATGAAAACTTGATGGTTGATGTGAAAGTCAGCAATCATAAATTAAA 713
BSNT_00323___ 717 AGAACGCGCCATCAGCATTATCCAAAGCCTTACAAACGCTTCATACGACA 766
||||||||||||||.|||.||.|||....|.|||||||||||.||.|| |
BPUM_0158___m 714 AGAACGCGCCATCACCATCATTCAACATGTGACAAACGCTTCCTATGA-A 762
BSNT_00323___ 767 C-AGCC-AGATACACTCTGGAACAAGCCGATCAT-CACGTCAAAACAGCA 813
| |||| .|| |.||.||.|||...||.|| |.| .|.||||||||.||.
BPUM_0158___m 763 CAAGCCTTGA-AAACGCTTGAAGCGGCAGA-CTTAGAAGTCAAAACCGCC 810
BSNT_00323___ 814 ATCGTCATGCTCAAAACAAGCACAGATCAGAAACAAGCAAAGACATTACT 863
|||||||||||..||||||.||||||..|||||..|||.|||...|||||
BPUM_0158___m 811 ATCGTCATGCTTCAAACAAACACAGACAAGAAAACAGCCAAGGATTTACT 860
BSNT_00323___ 864 CGATGAAGCAAACGGTTTCATTGACAAAGCAATCGAACATTA-CCATCCA 912
|.|..|||||||.|||...||.||||||||.|||..||||.| |.||||
BPUM_0158___m 861 CAACAAAGCAAATGGTCATATCGACAAAGCCATCTCACATCATCAATCC- 909
BSNT_00323___ 913 TGA 915
|.|
BPUM_0158___m 910 TAA 912
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