Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00315 and BPUM_0153
See
Amino acid alignment /
Visit
BSNT_00315 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:14
# Commandline: needle
# -asequence dna-align/BSNT_00315___ybbC.1.24716.seq
# -bsequence dna-align/BPUM_0153___ybbC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00315___ybbC-BPUM_0153___ybbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00315___ybbC-BPUM_0153___ybbC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00315___ybbC
# 2: BPUM_0153___ybbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1308
# Identity: 896/1308 (68.5%)
# Similarity: 896/1308 (68.5%)
# Gaps: 123/1308 ( 9.4%)
# Score: 2873.0
#
#
#=======================================
BSNT_00315___ 1 ATGAGAAAAACA---------ATATTCGC-----TTTTCTGACAGGGCTC 36
.|||.||||||| |||.|||| || |||
BPUM_0153___y 1 TTGAAAAAAACAGCAAGCTTGATACTCGCAAGCATT-----------CTC 39
BSNT_00315___ 37 ATGATGTTCGGAACGATAACCGCTGCCTCTGCTTCACCCG-ATTCAAAGA 85
|||||| .|.||..|.|||||.||| ||.|||| |..|.||||
BPUM_0153___y 40 ATGATG---AGCACATTGACCGCCGCC------TCCCCCGCAAACCAAGA 80
BSNT_00315___ 86 ATCAAAC----------GGCTAAAAAGCCTAAAGTCCAGACCGGTATAGA 125
| |.||| ||..|||||| |.|.||||.|.||.||.||.||
BPUM_0153___y 81 A-CGAACAGATACTAAAGGAAAAAAAG-CGACAGTCAAAACAGGGATTGA 128
BSNT_00315___ 126 CACGCTCTTGCCAGACTATAAAAAACAGCTC--------AAGGGAAAACG 167
.||.||..|..|||.| |||...|| |||||||||.|
BPUM_0153___y 129 AACACTACTCTCAGGC-------AACCTTTCATGGTTAAAAGGGAAAAAG 171
BSNT_00315___ 168 CATCGGACTGATCACCAATCCAACCGGAGTAAACGCATCTCTGAAAAGCA 217
.|.||.||.||.||.||||||||.||..|..|.|||..|.|||||||||
BPUM_0153___y 172 -GTAGGCCTCATTACGAATCCAACTGGTATTGATGCAAATATGAAAAGCA 220
BSNT_00315___ 218 GTGTCGATATTCTTTACGAGAACCCAGATATCAAACTGACAG--CTTTAT 265
||||||||.||||.|..|||.|.|||.|||||||.||.||.| ||||||
BPUM_0153___y 221 GTGTCGATCTTCTATTTGAGCATCCAAATATCAAGCTTACTGCTCTTTAT 270
BSNT_00315___ 266 TCGGCCCTGAACACGGCGTCCGCGGTGACGCCCAGGCTGGAGACGAAGTA 315
||.||||||||.||.||.|||||.||.||.||.||.|||||.|..||.
BPUM_0153___y 271 --GGGCCTGAACATGGTGTGCGCGGCGATGCACAAGCAGGAGAAGGCGTC 318
BSNT_00315___ 316 GGCTCTTACATTGACGAAAAAACCGGGGTACCCGTATACAGCCTCTACGG 365
|..||.||.|..||.||||||||.||..|.||.||.|||...|||||.||
BPUM_0153___y 319 GAATCCTATACCGATGAAAAAACAGGTCTTCCTGTTTACTCTCTCTATGG 368
BSNT_00315___ 366 AAAAACGAAAAAACCGACTCCAGAAATGCTGAAAAATGTCGATATTCTT- 414
||||||.|.||||||.||.||.||.|||||.||||||||.|| ..||||
BPUM_0153___y 369 AAAAACAAGAAAACCAACGCCTGACATGCTCAAAAATGTAGA-CGTCTTG 417
BSNT_00315___ 415 ATGTTTGACATTCAGGATGTCGGGACCCGTTTCTACACGTACATTTATAC 464
.|||||||.|||||.|||||.||..|.||||..|||||.||.|||||.||
BPUM_0153___y 418 CTGTTTGATATTCAAGATGTTGGTTCTCGTTATTACACCTATATTTACAC 467
BSNT_00315___ 465 AATGGCATACGCAATGGAAGCCGCTAAAGAAAACGGCATTCCATTTATGG 514
.|||||.||.||||||||.|||||.|||||||||..||||||.|||.|.|
BPUM_0153___y 468 GATGGCCTATGCAATGGAGGCCGCGAAAGAAAACAACATTCCCTTTGTTG 517
BSNT_00315___ 515 TGTTGGACCGTCCGAATCCTCAAGGAGGGAATCATA-TTGAAGGACCAAT 563
|..|.||||||||.||||| ||..|..|||.|.|.| |.|||||.||..|
BPUM_0153___y 518 TCCTAGACCGTCCAAATCC-CATTGGCGGATTAAAAGTAGAAGGCCCTGT 566
BSNT_00315___ 564 CTTAGAACCTGACTACGCCTCATTTGTCGGATTGTATCCCATTCCATTGA 613
||||||||||||..||||.||||||||.||..|.|||||.||.||||| |
BPUM_0153___y 567 CTTAGAACCTGAGCACGCTTCATTTGTAGGGCTCTATCCAATACCATT-A 615
BSNT_00315___ 614 AG-CATGGGATGACGATAGGCGAATTGGCTTTACTGTTCAACAAAGAATT 662
|| |||||.|||||.|..||.|||.|.||...|.|.||.|||||||||||
BPUM_0153___y 616 AGACATGGAATGACCACTGGTGAACTAGCCACATTCTTTAACAAAGAATT 665
BSNT_00315___ 663 TAGTATTAATGCCGATCTTACAGTGGTAAAAATGAAACACTGGAAGCGAA 712
|.||||||||||.|||.|.|||||..|.|||||||||||.||||||||..
BPUM_0153___y 666 TCGTATTAATGCTGATGTCACAGTCATCAAAATGAAACATTGGAAGCGGT 715
BSNT_00315___ 713 AAATGGATTTTGACGATACCCGA--TTGCCTTTCGTCCTCCCTTCGCCTA 760
..|||...|||||.| ||.||| .||||.||||||||.|||||.||||
BPUM_0153___y 716 CCATGACGTTTGATG--ACACGAAGCTGCCGTTCGTCCTTCCTTCACCTA 763
BSNT_00315___ 761 ACATGCCGACGGTGGAAAGCACATTTGTTTATCCTGCAACCGGGCTGATT 810
|.||||||||.|||||.||.||.|||||.|||||.||.||.||..|.|||
BPUM_0153___y 764 ATATGCCGACAGTGGATAGTACCTTTGTATATCCCGCCACAGGATTAATT 813
BSNT_00315___ 811 GAAGGAACAAATATATCCGAAGGGCGAGGGACAACAAAGCCATTCGAATT 860
|||||.||||||.|.||.|||||..||||.||||||||.||||||||..|
BPUM_0153___y 814 GAAGGGACAAATGTCTCTGAAGGCAGAGGAACAACAAAACCATTCGAGCT 863
BSNT_00315___ 861 GATCGGAGCTCCCTTTATCAAAAGCACAGAACTTGAAGAAACA-TTAAAC 909
.||.||.|||||.|.||||||.||||..||.||.|.|| |.|| |||||
BPUM_0153___y 864 CATTGGCGCTCCATATATCAATAGCAATGAGCTAGCAG-ATCATTTAAA- 911
BSNT_00315___ 910 AGCCTCCATT-----TGCCGGGCGTTACATTTAGGGCAGCATCCTTCACA 954
||.||| |...|||.||.|.||||||..|.|.|||.|||||.
BPUM_0153___y 912 ----TCAATTAAAACTAAAGGGTGTGAAATTTAGACCCGTATCATTCACC 957
BSNT_00315___ 955 CCGACGTTTTCTAAACAT-CAAGGAACGCTTTGCCACGGTGTGCAGCTCT 1003
||.||.|||||||||||| ||.|||| |||.|..||||||||||||||.|
BPUM_0153___y 958 CCCACTTTTTCTAAACATGCAGGGAA-GCTATCACACGGTGTGCAGCTAT 1006
BSNT_00315___ 1004 ATGTGACAGAAAGAGATAAGTTTGAAGCCGTTAAAACGGGTCTTTCAGTC 1053
|.||.|||||..|...|...||.|||||.||.|||||.|||.|.||..||
BPUM_0153___y 1007 ACGTCACAGACCGCTCTTCATTCGAAGCGGTAAAAACAGGTTTATCCATC 1056
BSNT_00315___ 1054 ATTAAAACCATACACGATCTCTATCCTGAGGATTTTGAGTTCCTGTC-AA 1102
||.|||.|||||||.|||.|.|||||..|.||.|||||.||||| || ||
BPUM_0153___y 1057 ATCAAAGCCATACATGATTTATATCCAAAAGAATTTGAATTCCT-TCAAA 1105
BSNT_00315___ 1103 CAGGTTCATTCGATAAACTGGCA--GGCAACGGCTGGATCAGGACAAAAA 1150
||||....||.|||||||| || ||.||.||.||||||| ||.||
BPUM_0153___y 1106 CAGGAAGCTTTGATAAACT--CATCGGGAATGGTTGGATCA----AAGAA 1149
BSNT_00315___ 1151 TTGAAA------ATGGAACTTCGATTGAGAACATCAT-AAACAGCTATGA 1193
|||| |.||||||||..|..|..||||||| |||| |||||
BPUM_0153___y 1150 --GAAATCAATCAAGGAACTTCCGTCAAACACATCATGAAAC-GCTAT-- 1194
BSNT_00315___ 1194 AAAAACA----CTCCAACAATTCAGCAAAACAA--GAAAAAAATATCTCA 1237
.|.|| |||.||...||| .||||.|| |.||.||||||||||
BPUM_0153___y 1195 --CATCACGACCTCAAATCGTTC--GAAAAGAAACGGAAGAAATATCTCA 1240
BSNT_00315___ 1238 TTTATTAG 1245
|.|||||.
BPUM_0153___y 1241 TCTATTAA 1248
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.