Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00266 and BPUM_0148
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:13
# Commandline: needle
# -asequence dna-align/BSNT_00266___ybaN.1.24716.seq
# -bsequence dna-align/BPUM_0148___ybaN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00266___ybaN-BPUM_0148___ybaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00266___ybaN-BPUM_0148___ybaN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00266___ybaN
# 2: BPUM_0148___ybaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 806
# Identity: 526/806 (65.3%)
# Similarity: 526/806 (65.3%)
# Gaps: 82/806 (10.2%)
# Score: 1597.5
#
#
#=======================================
BSNT_00266___ 1 GTGAATCACTTCTATGTGTGGCACATTAAACGGGTGAAACAATTAATTAT 50
.|||.||..||.|||||||.||..|||||||||.||||.|||.|..|.||
BPUM_0148___y 1 TTGAGTCGATTATATGTGTTGCCTATTAAACGGCTGAAGCAAGTTGTCAT 50
BSNT_00266___ 51 TATACTTATCGCCGCATTTGCAGCTGCCAGCTTTTTTTATATCCAAA--G 98
|||.|||.|.||.||..||||||||||.|.||||||||||.|.|||| |
BPUM_0148___y 51 TATTCTTGTAGCAGCCCTTGCAGCTGCAACCTTTTTTTATGTACAAAAGG 100
BSNT_00266___ 99 AGCTGTCCCGCTTCCCGTGTTTTCAACTGACAC-CGGACCTAAAGCCATT 147
.||.| |||||..|.||.|||..|||.|| || ||||||...|||.|||
BPUM_0148___y 101 CGCCG--CCGCTGTCGGTATTTAAAACAGA-ACACGGACCCCGAGCTATT 147
BSNT_00266___ 148 TATAAAGGAGAAACAGATTCTAAAGATATTTCACTTACTTTCGATATCAG 197
||||||||.||.||....||.|||.||.|.||.||.|||||..|||||.|
BPUM_0148___y 148 TATAAAGGCGAGACTTCCTCAAAACATGTCTCCCTCACTTTTAATATCGG 197
BSNT_00266___ 198 CTGGGGCGATGAGAGAGCAGAACCGATACTTAA---TACTCTGAAAGCAA 244
||||||.|||||||..||.|..||.|| .|||| |.||..||.|| .
BPUM_0148___y 198 CTGGGGAGATGAGAAGGCTGTGCCTAT-TTTAAATGTCCTTCGAGAG--T 244
BSNT_00266___ 245 ACGGGATTAAAAATGCAACGTTTTTTCTTTCAGCTTCTTGGGCAGAACGC 294
|||..||.||.||.||.||.||||||||.||.|||||||||||.||.||.
BPUM_0148___y 245 ACGATATAAAGAACGCTACTTTTTTTCTGTCTGCTTCTTGGGCTGAGCGT 294
BSNT_00266___ 295 CATCCCGACACAGTGGCCCGTATCGT------------AAAGGACGGCCA 332
|||||.|| |||||| |.||||||||||
BPUM_0148___y 295 CATCCGGA------------TATCGTCAAACAAATTAGAGAGGACGGCCA 332
BSNT_00266___ 333 TCAAATCGGGAGCATGGGCTACGCTTATAAAAACTAT-GCCAATTTAGAG 381
.|||||.||.|||.|.|||||.|||||||||||.||| ||||..||..||
BPUM_0148___y 333 CCAAATTGGCAGCCTTGGCTATGCTTATAAAAATTATAGCCAGCTTGAAG 382
BSNT_00266___ 382 AGCAGCGAAAT-AAAAAAGGACATGAACCGTGCGCAAACAGCCTTTGAAA 430
| .||.||||| ||..|||..|.|| .|||.||.||||...|.|||.|||
BPUM_0148___y 383 A-TAGTGAAATCAAGCAAGATCTTG-TCCGGGCACAAAATTCATTTCAAA 430
BSNT_00266___ 431 AGTTAGGGGTCAAAGACATACAGCTATTAAGACCCCCTACCGGCCAATT- 479
||.|.||..|..|.|||||.||.|||||||||||.||.||.||.|||||
BPUM_0148___y 431 AGCTTGGACTAGATGACATTCAACTATTAAGACCGCCAACTGGGCAATTT 480
BSNT_00266___ 480 ---CAATAAGAATGTTCTAAAGGTCGCAAAGCAATACAATTATACAGTCG 526
.||.|||.|| ||||..|.||.|..||.|||..||||||.||.|
BPUM_0148___y 481 AACGAAAAAGCAT----TAAAAATTGCCACACAGTACGGTTATACCGTTG 526
BSNT_00266___ 527 TTCATTACAGTGTGAACTCTCAAGACTGGACAAATCCCGGAGTTG----- 571
|.||||||||.||.||.||.||.||.|||...|||||.||.||.|
BPUM_0148___y 527 TCCATTACAGCGTCAATTCACAGGATTGGCTGAATCCAGGCGTCGATCAG 576
BSNT_00266___ 572 --------AAA---AAATCATCGACAATGTGACCAAGCAAGTTTCCGGTG 610
||| ||||.||||| .|||..|| .|
BPUM_0148___y 577 ATTGTTCAAAATGTAAATGATCGA----ATGAAAAA------------CG 610
BSNT_00266___ 611 GAGACATTATTCTTTTACATGCCTCCGATTCGGCAAAACAAACAGAAGAA 660
||||||||.||||..||||||||||.|||||.||||..|||||.|...||
BPUM_0148___y 611 GAGACATTGTTCTCCTACATGCCTCAGATTCAGCAACCCAAACCGCTCAA 660
BSNT_00266___ 661 GCATTGCCTGATATCATCCATCAGCTGAAAGA-AAAAGGATTAAAAAATG 709
||.||.||.|.|||..|..|.||..|.||||| ||||...|| |||||.|
BPUM_0148___y 661 GCCTTACCAGCTATTTTGAAACAAATCAAAGAGAAAAACCTT-AAAAACG 709
BSNT_00266___ 710 TAACCGTGGGTGACCTCATCGCAAATTCTGATGCCAAATCCGCAGAGGTA 759
|.||.||.||.||.||.|||.|.|||.|..|..|.|.|||..|.||.||.
BPUM_0148___y 710 TGACGGTTGGCGAACTGATCTCCAATACCAAAACTAGATCATCTGAAGTT 759
BSNT_00266___ 760 AAGTAA 765
|||||.
BPUM_0148___y 760 AAGTAG 765
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