Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00263 and BPUM_0145
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:13
# Commandline: needle
# -asequence dna-align/BSNT_00263___ybaL.1.24716.seq
# -bsequence dna-align/BPUM_0145___ybaL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00263___ybaL-BPUM_0145___ybaL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00263___ybaL-BPUM_0145___ybaL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00263___ybaL
# 2: BPUM_0145___ybaL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1085
# Identity: 803/1085 (74.0%)
# Similarity: 803/1085 (74.0%)
# Gaps: 52/1085 ( 4.8%)
# Score: 2926.5
#
#
#=======================================
BSNT_00263___ 1 ATGATAAGAGAAGATGAAGTAAGAAAACTAGTCGGAGAA-ATGCGCGAAC 49
|||||..||.|||||||.||.|||||||||||.|| ||| |||..|||||
BPUM_0145___y 1 ATGATCGGACAAGATGATGTGAGAAAACTAGTTGG-GAAGATGGACGAAC 49
BSNT_00263___ 50 CTTTTCTTCAAAGACCTCTGGGAGAATTGGATGCCGTTAAGGAAATTAAA 99
||||.||.||.|.|||.||.||.||..||||||||.|.||||||||.|..
BPUM_0145___y 50 CTTTCCTACATATACCGCTTGGTGAGCTGGATGCCATCAAGGAAATCAGC 99
BSNT_00263___ 100 ATAAAGCCTGAAAAACGGCATATCAGTGTAAAAGTCGCTCTTGCAAAAAC 149
.||||||||||||||...|||.|.|||.||||.||.|||.||||.|||||
BPUM_0145___y 100 CTAAAGCCTGAAAAAGAACATGTGAGTTTAAAGGTGGCTATTGCTAAAAC 149
BSNT_00263___ 150 AGGAACTGCAGAACAAATGCAGATTCAGCAAGAGATCGTAAACGTATTAA 199
.||.|||||.||.||||||.|..|.||||||||.||||||.|.|..||.|
BPUM_0145___y 150 GGGTACTGCTGAGCAAATGAAACTGCAGCAAGACATCGTACAAGCCTTGA 199
BSNT_00263___ 200 AAGGGGCAGGAGCTGAGACAGTCGGCCTTCGATTTGAAGAGCTGCCTGAA 249
|||..|..||.|||.|.|||||.||.|||||.||||||||.||||||.|.
BPUM_0145___y 200 AAGCAGAGGGTGCTAACACAGTAGGACTTCGTTTTGAAGAACTGCCTCAG 249
BSNT_00263___ 250 GAAACGGTTGCTAAATTCCGGG----CGCCGTC---AGCTGA-GAAAAAA 291
|||||..||| ||| || .|||||| ||.||| |||.|||
BPUM_0145___y 250 GAAACTCTTG--AAA-----GGTTTATGCCGTCACAAGATGAGGAAGAAA 292
BSNT_00263___ 292 AC-------ATTATTAAATATGGATAACCCGCCAGTCTTTCTTGCCGTAG 334
|| |||.|.|| ||.||.||.|..||.|||||..|.|
BPUM_0145___y 293 ACCTACTCAATTCTAAA--------AATCCTCCTGAATTCCTTGCGATTG 334
BSNT_00263___ 335 CAAGTGGAAAAGGCGGCGTAGGCAAGTCAACTGTGTCCGTAAACCTAGCT 384
|.||||||||.||.|||||.||.||.||.||.|||||.||.|||||.|||
BPUM_0145___y 335 CGAGTGGAAAGGGAGGCGTTGGGAAATCCACCGTGTCTGTCAACCTTGCT 384
BSNT_00263___ 385 ATTTCTCTGGCTCGTCTAGGGAAAAAGGTTGGTTTAATTGATGCGGATAT 434
.|..|.||||||||||||||.|||||.|||||..|.||||||||.|||||
BPUM_0145___y 385 GTAGCACTGGCTCGTCTAGGAAAAAAAGTTGGACTGATTGATGCAGATAT 434
BSNT_00263___ 435 TTATGGGTTCAGTGTGCCGGACATGATGGGTATCACTGTGCGTCCAACGA 484
||||||.||.|||||.|||||.||||||||.|||||.||..|.||||||.
BPUM_0145___y 435 TTATGGCTTTAGTGTACCGGATATGATGGGAATCACCGTCAGACCAACGG 484
BSNT_00263___ 485 TTGAAGGAGAGAAACTTCTTCCTGTTGAACGCTTTGGAGTAAAGGTCATG 534
||.||||.||.|||.||.|||||||.|||||||||||.||.||.||.||.
BPUM_0145___y 485 TTAAAGGGGAAAAAATTATTCCTGTGGAACGCTTTGGTGTCAAAGTGATT 534
BSNT_00263___ 535 TCAATGGGCTTTTTCGTAGAAGAAAATGCTCCGGTCGTATGGAGAGGACC 584
||||||||||||||.||.|||||||||||.||||||.|.|||||||||||
BPUM_0145___y 535 TCAATGGGCTTTTTTGTTGAAGAAAATGCACCGGTCATTTGGAGAGGACC 584
BSNT_00263___ 585 GATGCTCGGCAAAATGCTGAATAACTTTTTCCATGAAGTAGAGTGGGGAG 634
||||||.||.||||||||.||||||||.|||||.||||||||||||||||
BPUM_0145___y 585 GATGCTTGGTAAAATGCTAAATAACTTCTTCCACGAAGTAGAGTGGGGAG 634
BSNT_00263___ 635 AAGTAGACTA-----TATCGTTCTTGATCTTCCGCCTGGTACAGGGGATG 679
||.||||.|| ||| |.||.|||||||||||.||.||.||||
BPUM_0145___y 635 AATTAGATTACTTACTAT-----TAGACCTTCCGCCTGGAACTGGAGATG 679
BSNT_00263___ 680 TTGCTCTCGATGTACATACAATGCTTCCGAGCTGCAAAGAAATCATCGTA 729
|.||.||.|||.|.||||||||||||||.|||||.|||||||||||.||.
BPUM_0145___y 680 TGGCGCTTGATATTCATACAATGCTTCCAAGCTGTAAAGAAATCATTGTC 729
BSNT_00263___ 730 TCTACGCCGCATCCGACAGCTGCTTTTGTCGCGGCCAGAGCGGGCTCTAT 779
.|.||.||||||||.||||||||.||.||.||.||.|||||.|||.|.||
BPUM_0145___y 730 ACAACACCGCATCCTACAGCTGCCTTCGTTGCTGCTAGAGCAGGCGCAAT 779
BSNT_00263___ 780 GGCGATTAAAACCGATCATGAGGTCGTGGGGGTCATAGAGAACATG-GCT 828
|||..||.||||.|||||.||.||..|.||||||.|.|||||.||| ||
BPUM_0145___y 780 GGCACTTCAAACAGATCACGATGTGCTAGGGGTCGTTGAGAATATGAGC- 828
BSNT_00263___ 829 TATTATGAAAGTGCAAAGACAGGGGAAAGAGAATATGTCTTTGGAAAAGG 878
|||||||||||...|||.|||||.||||.|||||||||||||||||||||
BPUM_0145___y 829 TATTATGAAAGCAAAAAAACAGGTGAAAAAGAATATGTCTTTGGAAAAGG 878
BSNT_00263___ 879 CGGAGGAGATAAACTGGCTGAGGAACTA----AATGTGCCTTTGCTCGGC 924
.||.||.||.||.||.||.||.|||||| .||..|.|.|||.||
BPUM_0145___y 879 GGGCGGGGACAAGCTAGCGGAAGAACTACGAGTATCGGTCCTTGGTC--- 925
BSNT_00263___ 925 AGAATCCCATTGAAACAGCCAGATTGGGATAAGGACCAATTTGCTCCGTC 974
.|||.||.||.|.||||||.||.|||.||.|.||..|.||||||||.||
BPUM_0145___y 926 -AAATACCTTTAAGACAGCCTGACTGGAATGAAGATGATTTTGCTCCATC 974
BSNT_00263___ 975 TGTTTACGACGAGAATCATCCAATCGGAGAAATATATCAGGACATCGCAA 1024
|||.||.||.|.||.||||||.|.|||||||.|.|||||..||||.||.|
BPUM_0145___y 975 TGTCTATGATGCGAGTCATCCGACCGGAGAAGTGTATCAACACATTGCGA 1024
BSNT_00263___ 1025 AAAAAATAGATGCAAAAATGTCTGTGCAGGTATAA 1059
|.|||.|...||.|.||.|..|.||..|.|.||||
BPUM_0145___y 1025 ATAAAGTCATTGAACAATTAGCAGTAAAAGCATAA 1059
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