Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00256 and BPUM_0137
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:12
# Commandline: needle
# -asequence dna-align/BSNT_00256___rpsI.1.24716.seq
# -bsequence dna-align/BPUM_0137___rpsI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00256___rpsI-BPUM_0137___rpsI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00256___rpsI-BPUM_0137___rpsI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00256___rpsI
# 2: BPUM_0137___rpsI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 394
# Identity: 336/394 (85.3%)
# Similarity: 336/394 (85.3%)
# Gaps: 2/394 ( 0.5%)
# Score: 1436.0
#
#
#=======================================
BSNT_00256___ 1 TTGGCACAGGTTCAATATTACGGTACTGGCCGTCGTAAAAGCTCTGTAGC 50
||||||||||||||||||||||||||.||.|||||||||||.||||||||
BPUM_0137___r 1 TTGGCACAGGTTCAATATTACGGTACAGGTCGTCGTAAAAGTTCTGTAGC 50
BSNT_00256___ 51 GCGTGTGCGTTTAGTTCCAGGAGAAGGCCGTATCGTCGTTAATAATCGTG 100
|||.||.||.|||||||||||.||||||||||||||||||||||||||||
BPUM_0137___r 51 GCGCGTTCGCTTAGTTCCAGGTGAAGGCCGTATCGTCGTTAATAATCGTG 100
BSNT_00256___ 101 AAATCAGCGAACACATCCCATCTGCAGCTTTAATCGAAGATATCAAACAA 150
||||.|..|||.||||.||||..||.||||||||||||||..|.||||||
BPUM_0137___r 101 AAATTACTGAATACATTCCATTCGCTGCTTTAATCGAAGACGTGAAACAA 150
BSNT_00256___ 151 CCATT-AACTTTGACTGAAACAGCTGGCACTTATGATGTTTTAGTAAACG 199
||.|| ||| .|.||.|||||||||..||..||.||||||.|.||||..|
BPUM_0137___r 151 CCTTTGAAC-ATCACAGAAACAGCTAACAGCTACGATGTTCTTGTAACTG 199
BSNT_00256___ 200 TACATGGAGGCGGCTTATCTGGTCAAGCTGGAGCAATCCGTCACGGTATC 249
|.||.||.||.||.||.||||||||||||||||||||.||||||||||||
BPUM_0137___r 200 TTCACGGTGGTGGATTCTCTGGTCAAGCTGGAGCAATTCGTCACGGTATC 249
BSNT_00256___ 250 GCTCGTGCTTTGCTTGAAGCAGATCCAGAATACCGTACAACTCTTAAACG 299
.||||||||.|.||.||||.||||||.||.|||||||||.|.||||||||
BPUM_0137___r 250 TCTCGTGCTCTTCTAGAAGTAGATCCTGAGTACCGTACATCACTTAAACG 299
BSNT_00256___ 300 TGCAGGTCTTCTGACTCGTGACGCTCGTATGAAAGAACGTAAAAAATACG 349
|||.||.|||||.|||||||||.|.|||||||||||.|||||.|||||||
BPUM_0137___r 300 TGCTGGACTTCTTACTCGTGACCCACGTATGAAAGAGCGTAAGAAATACG 349
BSNT_00256___ 350 GTCTTAAAGGCGCTCGTCGTGCACCTCAGTTCTCAAAACGTTAA 393
|||||||||||||.|||||.||||||||||||||||||||||||
BPUM_0137___r 350 GTCTTAAAGGCGCACGTCGCGCACCTCAGTTCTCAAAACGTTAA 393
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