Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00249 and BPUM_0131
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:12
# Commandline: needle
# -asequence dna-align/BSNT_00249___rplQ.1.24716.seq
# -bsequence dna-align/BPUM_0131___rplQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00249___rplQ-BPUM_0131___rplQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00249___rplQ-BPUM_0131___rplQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00249___rplQ
# 2: BPUM_0131___rplQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 317/363 (87.3%)
# Similarity: 317/363 (87.3%)
# Gaps: 0/363 ( 0.0%)
# Score: 1401.0
#
#
#=======================================
BSNT_00249___ 1 ATGTCATACAGAAAACTAGGACGTACGAGTGCACAGCGTAAAGCTATGCT 50
|||.||||||||||.||||||||.||.||||||||.||||||||.|||||
BPUM_0131___r 1 ATGGCATACAGAAAGCTAGGACGCACTAGTGCACAACGTAAAGCAATGCT 50
BSNT_00249___ 51 TCGTGATCTTACAACTGATTTGATCATCAACGAAAGAATCGAAACAACTG 100
||||||.||.||.|||||||||||||||||||||.|.|||||||||||||
BPUM_0131___r 51 TCGTGACCTAACGACTGATTTGATCATCAACGAACGCATCGAAACAACTG 100
BSNT_00249___ 101 AAACACGTGCGAAAGAACTTCGCTCTGTAGTTGAAAAAATGATCACGCTT 150
||||||||||||||||||||||||||||||||||||||||||||||.|||
BPUM_0131___r 101 AAACACGTGCGAAAGAACTTCGCTCTGTAGTTGAAAAAATGATCACTCTT 150
BSNT_00249___ 151 GGCAAACGCGGTGATCTTCACGCTCGTCGTCAAGCTGCTGCATACATCCG 200
|||||||||||.||||||||.|||||.|||||||||||.||.|||||.||
BPUM_0131___r 151 GGCAAACGCGGAGATCTTCATGCTCGCCGTCAAGCTGCAGCTTACATTCG 200
BSNT_00249___ 201 CAACGAGGTTGCAAACGAAGAAAATAACCAAGATGCACTTCAAAAATTAT 250
.||.||.||.||.||||..||||..|||||||||||||||||||||||||
BPUM_0131___r 201 TAATGAAGTAGCTAACGCTGAAACAAACCAAGATGCACTTCAAAAATTAT 250
BSNT_00249___ 251 TCTCTGACATTGCAACTCGTTACGAGGAGCGCCAAGGCGGATACACACGT 300
||.|||||.||||||||||.|||||.||.||||||||.||||||||.|||
BPUM_0131___r 251 TCGCTGACGTTGCAACTCGCTACGAAGATCGCCAAGGTGGATACACTCGT 300
BSNT_00249___ 301 ATTATGAAGCTTGGTCCTCGCCGTGGTGACGGAGCACCAATGGCAATTAT 350
||.|||||||||||.|||||.||.||.||.||.|||||||||||..|.||
BPUM_0131___r 301 ATCATGAAGCTTGGACCTCGTCGCGGCGATGGCGCACCAATGGCTGTCAT 350
BSNT_00249___ 351 CGAATTGGTTTAA 363
.|||||.||||||
BPUM_0131___r 351 TGAATTAGTTTAA 363
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