Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00247 and BPUM_0129
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:12
# Commandline: needle
# -asequence dna-align/BSNT_00247___rpsK.1.24716.seq
# -bsequence dna-align/BPUM_0129___rpsK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00247___rpsK-BPUM_0129___rpsK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00247___rpsK-BPUM_0129___rpsK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00247___rpsK
# 2: BPUM_0129___rpsK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity: 354/396 (89.4%)
# Similarity: 354/396 (89.4%)
# Gaps: 0/396 ( 0.0%)
# Score: 1602.0
#
#
#=======================================
BSNT_00247___ 1 ATGGCTGCTGCTCGTAAATCTAACACGCGTAAACGTCGCGTGAAAAAGAA 50
||||||||||||||||||...||.||||||||||||||||||||||||||
BPUM_0129___r 1 ATGGCTGCTGCTCGTAAACAAAATACGCGTAAACGTCGCGTGAAAAAGAA 50
BSNT_00247___ 51 TATTGAGTCTGGAATTGCTCATATTCGTTCAACTTTCAATAACACGATCG 100
||||||..|||||||.||||||||.|||||.||||||||.||||||||.|
BPUM_0129___r 51 TATTGAAGCTGGAATCGCTCATATCCGTTCCACTTTCAACAACACGATTG 100
BSNT_00247___ 101 TTACGATCACTGACACTCATGGTAATGCTATTTCTTGGTCTAGTGCCGGA 150
|.|||||.|||||...||||||.||.||.|||||||||||.|||||.||.
BPUM_0129___r 101 TAACGATTACTGATGTTCATGGAAACGCAATTTCTTGGTCAAGTGCTGGT 150
BSNT_00247___ 151 GCTTTAGGATTCAGAGGTTCTCGTAAATCTACTCCTTTTGCTGCGCAAAT 200
||.|||||||||||||||||||||||||||||||||||.|||||.|||||
BPUM_0129___r 151 GCATTAGGATTCAGAGGTTCTCGTAAATCTACTCCTTTCGCTGCACAAAT 200
BSNT_00247___ 201 GGCTGCAGAAACAGCTGCTAAAGGTTCAATCGAACATGGTCTTAAAACTC 250
||||||.|||||.||||||||||||||.||||||||||||||||||||.|
BPUM_0129___r 201 GGCTGCTGAAACTGCTGCTAAAGGTTCTATCGAACATGGTCTTAAAACAC 250
BSNT_00247___ 251 TAGAGGTTACTGTTAAAGGACCTGGTTCAGGCCGTGAAGCTGCAATCCGT 300
|.||.||.|||||||||||.||||||||.||.||||||||||||||.|||
BPUM_0129___r 251 TTGAAGTAACTGTTAAAGGTCCTGGTTCTGGTCGTGAAGCTGCAATTCGT 300
BSNT_00247___ 301 GCACTTCAAGCTGCTGGACTAGAAGTCACTGCTATCAGAGACGTAACTCC 350
||||||||||||||.||.||.|||||.|||||.|||||||||||||||||
BPUM_0129___r 301 GCACTTCAAGCTGCAGGTCTTGAAGTTACTGCAATCAGAGACGTAACTCC 350
BSNT_00247___ 351 TGTTCCTCATAACGGATGCCGTCCACCAAAACGTCGCCGCGTGTAA 396
.|||||||||||||||||||||||||||||||||||||||||||||
BPUM_0129___r 351 AGTTCCTCATAACGGATGCCGTCCACCAAAACGTCGCCGCGTGTAA 396
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