Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00245 and BPUM_0127

See Amino acid alignment / Visit BSNT_00245 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:12
# Commandline: needle
#    -asequence dna-align/BSNT_00245___rpmJ.1.24716.seq
#    -bsequence dna-align/BPUM_0127___rpmJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00245___rpmJ-BPUM_0127___rpmJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00245___rpmJ-BPUM_0127___rpmJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00245___rpmJ
# 2: BPUM_0127___rpmJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:     108/114 (94.7%)
# Similarity:   108/114 (94.7%)
# Gaps:           0/114 ( 0.0%)
# Score: 516.0
# 
#
#=======================================

BSNT_00245___      1 ATGAAAGTGAGACCATCAGTTAAACCAATCTGCGAAAAATGTAAAGTTAT     50
                     |||||||||||||||||.||||||||.|||||.|||||||||||||||||
BPUM_0127___r      1 ATGAAAGTGAGACCATCTGTTAAACCTATCTGTGAAAAATGTAAAGTTAT     50

BSNT_00245___     51 TCGCAGAAAAGGAAAAGTAATGGTGATCTGTGAAAATCCAAAGCATAAAC    100
                     ||||||||||||||||||||||||||||||||||||.|||||.|||||||
BPUM_0127___r     51 TCGCAGAAAAGGAAAAGTAATGGTGATCTGTGAAAACCCAAAACATAAAC    100

BSNT_00245___    101 AAAAACAAGGATAA    114
                     ||||||||||.|||
BPUM_0127___r    101 AAAAACAAGGCTAA    114


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