Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00241 and BPUM_0123
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:12
# Commandline: needle
# -asequence dna-align/BSNT_00241___adk.1.24716.seq
# -bsequence dna-align/BPUM_0123___adk.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00241___adk-BPUM_0123___adk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00241___adk-BPUM_0123___adk.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00241___adk
# 2: BPUM_0123___adk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 662
# Identity: 539/662 (81.4%)
# Similarity: 539/662 (81.4%)
# Gaps: 16/662 ( 2.4%)
# Score: 2221.0
#
#
#=======================================
BSNT_00241___ 1 ATGAACTTAGTCTTAATGGGGCTTCCTGGTGCCGGTAAAGGCACACAGGG 50
||||||||||||||||||||||||||.|||||.|||||||||||.||||.
BPUM_0123___a 1 ATGAACTTAGTCTTAATGGGGCTTCCGGGTGCTGGTAAAGGCACTCAGGC 50
BSNT_00241___ 51 CGAACGAATTGTTGAGGATTATGGGATTCCTCATATCTCAACAGGAGATA 100
.||||||||||||||.|||||||||||.||||||||||||||||||||||
BPUM_0123___a 51 AGAACGAATTGTTGATGATTATGGGATCCCTCATATCTCAACAGGAGATA 100
BSNT_00241___ 101 TGTTCCGTGCTGCTATGAAAGAAGAAACACCACTCGGACTTGAAGCAAAA 150
|||||||.||||||||||||||.||.||||.|||.||.||.|||||||||
BPUM_0123___a 101 TGTTCCGCGCTGCTATGAAAGAGGAGACACAACTTGGGCTCGAAGCAAAA 150
BSNT_00241___ 151 TCTTATATTGATAAGGGAGAGCTCGTACCTGACGAAGTCACAATCGGAAT 200
||.|.|||.|||||.||||||||.||.|||||.||.|||||||||||.||
BPUM_0123___a 151 TCCTTTATCGATAAAGGAGAGCTTGTTCCTGATGAGGTCACAATCGGTAT 200
BSNT_00241___ 201 TGTAAAAGAGAGACTTGGCAAAGATGATTGTGAAAGAGGTTTTCTTCTGG 250
|||.|.|||.||||||||||||.|||||||||||..||||||||||||||
BPUM_0123___a 201 TGTTAGAGAAAGACTTGGCAAAAATGATTGTGAACAAGGTTTTCTTCTGG 250
BSNT_00241___ 251 ACGGATTTCCGCGAACAGTCGCTCAAGCCGAAGCTCTTGAAGAAATTCTT 300
|||||||||||||||||||||||||.||.||||||.|.|||||.|||||.
BPUM_0123___a 251 ACGGATTTCCGCGAACAGTCGCTCAGGCTGAAGCTTTAGAAGACATTCTA 300
BSNT_00241___ 301 GAGGAATACGGCAAGCCGATTGATTATGTCATTAACATTGAAGTCGACAA 350
.||||....||||...|||||||||||||||||||.|||.|||||||.||
BPUM_0123___a 301 AAGGACCTTGGCAGAACGATTGATTATGTCATTAATATTAAAGTCGATAA 350
BSNT_00241___ 351 AGACGCTCTCATGGAACGTCTGACTGGACGCAGAATTTGCAGTGTTTGCG 400
|||.|||.|.|||||.|||||||||||.||.||||||||||....|||||
BPUM_0123___a 351 AGATGCTTTGATGGAGCGTCTGACTGGCCGAAGAATTTGCAAAAATTGCG 400
BSNT_00241___ 401 GCACAACCTATCATTTAGTCTTTAATCCGCC-------GAAAACGCCGGG 443
|..||||.|||||||||||.||.|||||.|| |||||
BPUM_0123___a 401 GAGCAACATATCATTTAGTATTCAATCCACCTGCGAAAGAAAA------- 443
BSNT_00241___ 444 TATTTGTGATAAAGACGGAGGCGAACTCTATCAACGGGCAGATGATAATG 493
|.||||.|||||....||||||||.||.||||||||.|||||||||||||
BPUM_0123___a 444 TGTTTGCGATAAGTGTGGAGGCGAGCTTTATCAACGTGCAGATGATAATG 493
BSNT_00241___ 494 AGGAAACCGTCTCTAAACGGCTTGAGGTAAACATGAAGCAAACTCAGCCT 543
..||||||||.||.|...|.|||||.||||||.|.|||||.|||.|.|||
BPUM_0123___a 494 CAGAAACCGTTTCGACTAGACTTGAAGTAAACTTAAAGCAGACTGAACCT 543
BSNT_00241___ 544 TTACTTGATTTCTATTCAGAGAAAGGTTATCTTGCAAACGTGAATGG-CC 592
|||||..|.|||||||||||.|||||.||||||||||||.|..|||| .|
BPUM_0123___a 544 TTACTGAACTTCTATTCAGAAAAAGGATATCTTGCAAACATTGATGGTGC 593
BSNT_00241___ 593 AACAGGACATTCAAGACGTTTATGCAGATGTGAAGGATCTTCTTGGAGGA 642
|| |..|||||.|.||.||.|||||||||.|.||.||.||.|||||.|||
BPUM_0123___a 594 AA-AACACATTAACGATGTATATGCAGATATCAAAGACCTGCTTGGGGGA 642
BSNT_00241___ 643 TTAAAAAAATGA 654
|||||.||||||
BPUM_0123___a 643 TTAAATAAATGA 654
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