Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00239 and BPUM_0121
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence dna-align/BSNT_00239___rplO.1.24716.seq
# -bsequence dna-align/BPUM_0121___rplO.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00239___rplO-BPUM_0121___rplO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00239___rplO-BPUM_0121___rplO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00239___rplO
# 2: BPUM_0121___rplO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 443
# Identity: 391/443 (88.3%)
# Similarity: 391/443 (88.3%)
# Gaps: 4/443 ( 0.9%)
# Score: 1742.0
#
#
#=======================================
BSNT_00239___ 1 ATGAAACTTCATGAATTAAAACCTTCAGAAGGTTCACGCAA--AACGCGT 48
|||||||||||||||||.||.|||||||||||||||||.|| |||||
BPUM_0121___r 1 ATGAAACTTCATGAATTGAAGCCTTCAGAAGGTTCACGTAAAGAACGC-- 48
BSNT_00239___ 49 AATCGCGTAGGTCGTGGTATTGGTTCTGGCAACGGTAAAACAGCTGGTAA 98
||.||.||.||||||||||||||.||.||.|||||||||||..|||||||
BPUM_0121___r 49 AACCGTGTTGGTCGTGGTATTGGATCAGGTAACGGTAAAACTTCTGGTAA 98
BSNT_00239___ 99 AGGTCACAAAGGTCAAAACGCTCGTTCTGGCGGCGGTGTACGCCCTGGAT 148
||||||.|||||||||||||||||||||||||||||||||||||||||.|
BPUM_0121___r 99 AGGTCATAAAGGTCAAAACGCTCGTTCTGGCGGCGGTGTACGCCCTGGTT 148
BSNT_00239___ 149 TCGAGGGGGGACAAATGCCTTTATTCCAACGTCTTCCTAAACGCGGTTTC 198
||||.||.||.||.|||||||||||||||||||||||.|||||.|||||.
BPUM_0121___r 149 TCGAAGGTGGTCAGATGCCTTTATTCCAACGTCTTCCAAAACGTGGTTTT 198
BSNT_00239___ 199 ACTAACATCAACCGCAAGGAATACGCTGTAGTCAACCTAGACAAATTGAA 248
||.|||||||||||.||.||.||.||.||..|||||.||||||.|||.||
BPUM_0121___r 199 ACAAACATCAACCGTAAAGATTATGCGGTTATCAACTTAGACAGATTAAA 248
BSNT_00239___ 249 CGGTTTTGCAGAAGGAACGGAAGTCACTCCTGAACTTCTTCTAGAGACTG 298
|.||||||..||||||||||||||.|||||||||||||||||||||||||
BPUM_0121___r 249 CAGTTTTGACGAAGGAACGGAAGTAACTCCTGAACTTCTTCTAGAGACTG 298
BSNT_00239___ 299 GTGTTATTAGCAAACTTAATGCAGGAGTAAAGATTCTTGGCAACGGTAAA 348
|||..||.|||||..|.||.|||||||||||.||||||||||||||||||
BPUM_0121___r 299 GTGCAATAAGCAAGTTAAAAGCAGGAGTAAAAATTCTTGGCAACGGTAAA 348
BSNT_00239___ 349 TTAGAGAAAAAATTAACTGTAAAAGCCAATAAATTCTCTGCTTCTGCGAA 398
|||||.|||||||||||||||||||||||||||||||||||||||||.||
BPUM_0121___r 349 TTAGAAAAAAAATTAACTGTAAAAGCCAATAAATTCTCTGCTTCTGCTAA 398
BSNT_00239___ 399 AGAAGCTGTTGAAGCTGCTGGCGGTACAGCTGAGGTGATCTAA 441
||||||..||||||||||||||||||||||.||||||||||||
BPUM_0121___r 399 AGAAGCGATTGAAGCTGCTGGCGGTACAGCCGAGGTGATCTAA 441
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