Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00226 and BPUM_0108
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:10
# Commandline: needle
# -asequence dna-align/BSNT_00226___rpsC.1.24716.seq
# -bsequence dna-align/BPUM_0108___rpsC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00226___rpsC-BPUM_0108___rpsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00226___rpsC-BPUM_0108___rpsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00226___rpsC
# 2: BPUM_0108___rpsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity: 579/657 (88.1%)
# Similarity: 579/657 (88.1%)
# Gaps: 0/657 ( 0.0%)
# Score: 2583.0
#
#
#=======================================
BSNT_00226___ 1 GTGGGTCAAAAGGTAAATCCAGTCGGTCTTCGTATCGGAGTCATTCGTGA 50
|||||||||||||||||||||||.|||||||||||.||.|||||||||||
BPUM_0108___r 1 GTGGGTCAAAAGGTAAATCCAGTAGGTCTTCGTATTGGCGTCATTCGTGA 50
BSNT_00226___ 51 TTGGGAATCTAAGTGGTACGCTGGTAAAGATTACGCTGACTTCCTGCACG 100
||||||||||||.||||.|||.||.||||||||||||||||||.|.||.|
BPUM_0108___r 51 TTGGGAATCTAAATGGTTCGCAGGAAAAGATTACGCTGACTTCTTACATG 100
BSNT_00226___ 101 AAGATTTAAAAATTCGTGAATACATTAGCAAACGCCTTTCTGACGCTTCT 150
||||.||.|||||.|||||||.|||.|||||.||..|.||||||||.|||
BPUM_0108___r 101 AAGACTTGAAAATCCGTGAATTCATCAGCAAGCGTTTGTCTGACGCGTCT 150
BSNT_00226___ 151 GTTTCTAAAGTAGAAATCGAGCGTGCAGCAAACCGCGTTAACATTACGAT 200
||||||||||||||||||||.|||||.|||||||||||.||.||.||.||
BPUM_0108___r 151 GTTTCTAAAGTAGAAATCGAACGTGCTGCAAACCGCGTAAATATCACAAT 200
BSNT_00226___ 201 CCACACAGCTAAGCCTGGTATGGTTATCGGTAAAGGCGGTTCTGAAGTCG 250
||||||.|||||.||.||||||||.||.|||||||||||.||||||||.|
BPUM_0108___r 201 CCACACGGCTAAACCAGGTATGGTAATTGGTAAAGGCGGATCTGAAGTTG 250
BSNT_00226___ 251 AAGCACTTCGCAAAGCCCTTAACAGCCTTACTGGCAAGCGTGTACACATT 300
||||||||||.|||||.|||||||||||.||||||||.|||||||||||.
BPUM_0108___r 251 AAGCACTTCGTAAAGCTCTTAACAGCCTAACTGGCAAACGTGTACACATC 300
BSNT_00226___ 301 AACATTCTTGAAATCAAAAGAGCAGATCTTGATGCACAGCTAGTTGCTGA 350
|||||.|||||||||||||||||||||||||||||.||||||||||||||
BPUM_0108___r 301 AACATCCTTGAAATCAAAAGAGCAGATCTTGATGCTCAGCTAGTTGCTGA 350
BSNT_00226___ 351 CAACATCGCTCGTCAATTAGAAAACCGTGTTTCTTTCCGCCGTGCGCAGA 400
.|||||||||||||||.|.|||||.|||.||||.|||||.|||||.||.|
BPUM_0108___r 351 AAACATCGCTCGTCAACTTGAAAATCGTATTTCATTCCGTCGTGCACAAA 400
BSNT_00226___ 401 AACAACAAATCCAACGTACTATGCGTGCTGGAGCACAAGGTGTGAAAACA 450
|||||..|||||||||.||.||||||||||||||||||||..|.||||||
BPUM_0108___r 401 AACAAACAATCCAACGCACAATGCGTGCTGGAGCACAAGGAATCAAAACA 450
BSNT_00226___ 451 ATGGTTTCTGGTCGTCTTGGCGGTGCAGATATCGCTCGTTCTGAATACTA 500
||||||||||||||||||||||||||||||||.||||||||||||||.||
BPUM_0108___r 451 ATGGTTTCTGGTCGTCTTGGCGGTGCAGATATTGCTCGTTCTGAATATTA 500
BSNT_00226___ 501 CAGTGAAGGAACTGTTCCATTGCACACATTACGTGCGGACATTGACTATG 550
|||||||||.||||||||.|||||||||.|.|||||.|||||.|||||||
BPUM_0108___r 501 CAGTGAAGGTACTGTTCCGTTGCACACACTTCGTGCTGACATCGACTATG 550
BSNT_00226___ 551 CAACATCTGAAGCTGATACTACTTACGGTAAGCTTGGTGTAAAAGTCTGG 600
|.||..||||||||||.||||||||.|||||||||||.||||||||.|||
BPUM_0108___r 551 CTACTGCTGAAGCTGACACTACTTATGGTAAGCTTGGCGTAAAAGTATGG 600
BSNT_00226___ 601 ATCTATCGTGGAGAGGTTCTTCCTACTAAGAAGAAAAAAGAGGAAGGAGG 650
||||||||||||||.||.|||||.|||||||||||.|..|.|||||||||
BPUM_0108___r 601 ATCTATCGTGGAGAAGTCCTTCCAACTAAGAAGAATACTGCGGAAGGAGG 650
BSNT_00226___ 651 AAAATAA 657
|||||||
BPUM_0108___r 651 AAAATAA 657
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