Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00224 and BPUM_0105
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:10
# Commandline: needle
# -asequence dna-align/BSNT_00224___rplB.1.24716.seq
# -bsequence dna-align/BPUM_0105___rplB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00224___rplB-BPUM_0105___rplB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00224___rplB-BPUM_0105___rplB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00224___rplB
# 2: BPUM_0105___rplB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 834
# Identity: 743/834 (89.1%)
# Similarity: 743/834 (89.1%)
# Gaps: 0/834 ( 0.0%)
# Score: 3351.0
#
#
#=======================================
BSNT_00224___ 1 ATGGCGATTAAAAAGTATAAACCGACCTCTAATGGACGTCGTGGCATGAC 50
|||||||||||||||||||||||.|||..||||||.||||||||||||||
BPUM_0105___r 1 ATGGCGATTAAAAAGTATAAACCAACCAGTAATGGTCGTCGTGGCATGAC 50
BSNT_00224___ 51 AACTTCAGATTTTGCTGAAATCACGACTGACAAGCCGGAAAAATCCTTGC 100
.||||||||||||||||||||||||||||||||.||.||||||||.||||
BPUM_0105___r 51 TACTTCAGATTTTGCTGAAATCACGACTGACAAACCAGAAAAATCGTTGC 100
BSNT_00224___ 101 TTGCTCCCCTTCACAAAAAAGGCGGACGTAACAACCAAGGTAAATTGACT 150
||||.||.|||||||.||||||||||||||||||||||||||.|||||||
BPUM_0105___r 101 TTGCACCGCTTCACAGAAAAGGCGGACGTAACAACCAAGGTAGATTGACT 150
BSNT_00224___ 151 GTACGTCACCAAGGTGGCGGACATAAACGCCAATACCGTGTTATCGACTT 200
||.|||||.|||||||||||.||||||||.|||||||||.|.||||||||
BPUM_0105___r 151 GTTCGTCATCAAGGTGGCGGTCATAAACGTCAATACCGTATCATCGACTT 200
BSNT_00224___ 201 CAAACGCGATAAAGATGGTATACCTGGACGCGTTGCTACAGTTGAATACG 250
.||.||.||||||||.||||||||||||||||||||||||.|.||.||.|
BPUM_0105___r 201 TAAGCGTGATAAAGACGGTATACCTGGACGCGTTGCTACAATCGAGTATG 250
BSNT_00224___ 251 ATCCAAACCGTTCAGCTAACATCGCTCTAATCAACTATGCAGACGGAGAA 300
||||||||||||||||.||.||||||||..|.|||||||||||.||.||.
BPUM_0105___r 251 ATCCAAACCGTTCAGCGAATATCGCTCTTGTAAACTATGCAGATGGTGAG 300
BSNT_00224___ 301 AAACGTTACATTCTTGCTCCTAAAGGAATTCAAGTAGGTACTGAAATCAT 350
||||||||||||||||||||.||||||||.|||||.|||||||||.|.|.
BPUM_0105___r 301 AAACGTTACATTCTTGCTCCGAAAGGAATCCAAGTTGGTACTGAAGTTAC 350
BSNT_00224___ 351 GTCAGGTCCTGAAGCTGACATTAAAGTAGGTAATGCACTTCCACTTATCA 400
.||.||.||.|||||||||||.||...||||||.||||||||||||||||
BPUM_0105___r 351 TTCTGGACCAGAAGCTGACATCAAGCCAGGTAACGCACTTCCACTTATCA 400
BSNT_00224___ 401 ACATCCCTGTTGGTACAGTTGTGCATAACATTGAATTAAAACCTGGTAAA 450
|||||||.|||||||||||||||||||||||||||||||||||.||||||
BPUM_0105___r 401 ACATCCCAGTTGGTACAGTTGTGCATAACATTGAATTAAAACCAGGTAAA 450
BSNT_00224___ 451 GGCGGACAGCTTGTACGTTCAGCTGGTACATCTGCTCAGGTTCTTGGTAA 500
||.|||||..|.||.|||||.||||||||.||||||||.|||||||||||
BPUM_0105___r 451 GGTGGACAATTAGTTCGTTCTGCTGGTACTTCTGCTCAAGTTCTTGGTAA 500
BSNT_00224___ 501 AGAAGGTAAATACGTTCTTGTACGTCTTAACTCTGGTGAAGTTCGCATGA 550
|||||||||||||||||||||||||.|.|||||.||.||||||||.||||
BPUM_0105___r 501 AGAAGGTAAATACGTTCTTGTACGTTTGAACTCAGGAGAAGTTCGTATGA 550
BSNT_00224___ 551 TCCTTTCTGCTTGCCGTGCTTCTATCGGTCAAGTAGGTAACGAACAGCAC 600
|.|||||||||||||||||..|||||||||||||.||.|||||.||.|||
BPUM_0105___r 551 TTCTTTCTGCTTGCCGTGCGACTATCGGTCAAGTTGGAAACGAGCAACAC 600
BSNT_00224___ 601 GAACTTATCAACATTGGTAAAGCTGGACGTTCTCGCTGGAAAGGCATCCG 650
|||.|.||.|||||.|||||||||||||||||.||||||||||||.|.||
BPUM_0105___r 601 GAATTAATTAACATCGGTAAAGCTGGACGTTCACGCTGGAAAGGCGTACG 650
BSNT_00224___ 651 TCCTACAGTTCGTGGTTCTGTAATGAACCCTAACGATCACCCACACGGTG 700
.||.||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0105___r 651 CCCAACAGTTCGTGGTTCTGTAATGAACCCTAACGATCACCCACACGGTG 700
BSNT_00224___ 701 GTGGTGAAGGACGTGCGCCAATCGGACGTAAATCACCAATGTCTCCATGG 750
|||||||||||||.||.|||||||||||||||||||||||||||||||||
BPUM_0105___r 701 GTGGTGAAGGACGCGCTCCAATCGGACGTAAATCACCAATGTCTCCATGG 750
BSNT_00224___ 751 GGCAAACCAACTCTTGGATTCAAGACTCGTAAGAAAAAGAACAAATCCGA 800
||||||||.||||||||||||||||||||||||||||..|||||.||.||
BPUM_0105___r 751 GGCAAACCGACTCTTGGATTCAAGACTCGTAAGAAAACCAACAAGTCTGA 800
BSNT_00224___ 801 TAAATTTATCGTACGTCGTCGTAAAAATAAATAA 834
||||||.||.|||||||||||||||||.||.|||
BPUM_0105___r 801 TAAATTCATTGTACGTCGTCGTAAAAACAAGTAA 834
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