Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00216 and BPUM_0099
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:10
# Commandline: needle
# -asequence dna-align/BSNT_00216___tuf.1.24716.seq
# -bsequence dna-align/BPUM_0099___tufA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00216___tuf-BPUM_0099___tufA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00216___tuf-BPUM_0099___tufA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00216___tuf
# 2: BPUM_0099___tufA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1193
# Identity: 1087/1193 (91.1%)
# Similarity: 1087/1193 (91.1%)
# Gaps: 4/1193 ( 0.3%)
# Score: 5006.0
#
#
#=======================================
BSNT_00216___ 1 ATGGCTAAAGAAAAATTCGACCGTTCCAAATCACATGCCAATATTGGTAC 50
||||||||||||||||||||||||||||||||.|||||.||.||||||||
BPUM_0099___t 1 ATGGCTAAAGAAAAATTCGACCGTTCCAAATCGCATGCTAACATTGGTAC 50
BSNT_00216___ 51 AATTGGACACGTTGACCATGGTAAAACAACTTTAACTGCTGCTATCACAA 100
|||||||||||||||||||||||||||||||.||||||||||||||.|||
BPUM_0099___t 51 AATTGGACACGTTGACCATGGTAAAACAACTCTAACTGCTGCTATCTCAA 100
BSNT_00216___ 101 CAGTACTTCATAAGAAATCTGGTAAAGGTACAGCTATGGCGTACGATCAA 150
||||.||||||||||||||||||||||||||.||||||||.||.||.|||
BPUM_0099___t 101 CAGTTCTTCATAAGAAATCTGGTAAAGGTACGGCTATGGCTTATGACCAA 150
BSNT_00216___ 151 ATTGATGGTGCTCCAGAAGAACGCGAGCGTGGTATCACAATCTCTACTGC 200
||.|||||||||||||||||.|||||||||||.|||||||||||.|||||
BPUM_0099___t 151 ATCGATGGTGCTCCAGAAGAGCGCGAGCGTGGAATCACAATCTCAACTGC 200
BSNT_00216___ 201 ACACGTTGAGTACGAAACTGAAACTCGTCACTATGCACACGTTGACTGCC 250
||||||||||||.|||||||||||||||||||||||||||||.|||||||
BPUM_0099___t 201 ACACGTTGAGTATGAAACTGAAACTCGTCACTATGCACACGTAGACTGCC 250
BSNT_00216___ 251 CAGGACACGCTGACTATGTTAAAAACATGATCACTGGTGCTGCGCAAATG 300
|||||||||||||||||||||||||||||||||||||||||||.||||||
BPUM_0099___t 251 CAGGACACGCTGACTATGTTAAAAACATGATCACTGGTGCTGCTCAAATG 300
BSNT_00216___ 301 GACGGAGCTATCCTTGTAGTATCTGCTGCTGATGGCCCAATGCCACAAAC 350
|||||.||.|||.|.||||||||||||||||||||.||||||||||||||
BPUM_0099___t 301 GACGGCGCGATCTTAGTAGTATCTGCTGCTGATGGTCCAATGCCACAAAC 350
BSNT_00216___ 351 TCGTGAGCACATCCTTCTTTCTAAAAACGTTGGTGTACCATACATCGTTG 400
.||||||||||||||.||||||...|||||.||||||||.||||||||.|
BPUM_0099___t 351 ACGTGAGCACATCCTACTTTCTCGTAACGTAGGTGTACCTTACATCGTAG 400
BSNT_00216___ 401 TATTCTTAAACAAATGCGACATGGTAGACGACGAAGAGCTTCTTGAACTA 450
|||||.|.||||||||.||||||||.|||||.||||||.|.||||||||.
BPUM_0099___t 401 TATTCCTTAACAAATGTGACATGGTTGACGATGAAGAGTTACTTGAACTT 450
BSNT_00216___ 451 GTTGAAATGGAAGTTCGCGATCTTCTTAGCGAATACGACTTCCCTGGTGA 500
|||||||||||||||||.||.||||||...||.||.||||||||||||||
BPUM_0099___t 451 GTTGAAATGGAAGTTCGTGACCTTCTTTCTGACTATGACTTCCCTGGTGA 500
BSNT_00216___ 501 TGATGTACCAGTTGTTAAAGGTTCTGCTCTTAAAGCTCTTGAAGGAGACG 550
.|||||.||||||.|.||||||||||||||||||||||||||||||||.|
BPUM_0099___t 501 CGATGTTCCAGTTATCAAAGGTTCTGCTCTTAAAGCTCTTGAAGGAGATG 550
BSNT_00216___ 551 CTGAGTGGGAAGCTAAAATCTTCGAACTTATGGATGCGGTTGATGAGTAC 600
||||.|..|||||.||||||||.|||||||||||.|||||||||||||||
BPUM_0099___t 551 CTGATTACGAAGCAAAAATCTTTGAACTTATGGACGCGGTTGATGAGTAC 600
BSNT_00216___ 601 ATCCCAACTCCAGAACGCGACACTGAAAAACCATTCATGATGCCAGTTGA 650
|||||||||||||||||.||||||||.||.||||||||||||||||||||
BPUM_0099___t 601 ATCCCAACTCCAGAACGTGACACTGAGAAGCCATTCATGATGCCAGTTGA 650
BSNT_00216___ 651 GGACGTATTCTCAATCACTGGTCGTGGTACAGTTGCTACTGGCCGTGTAG 700
|||||||||||||||||||||||||||.||||||||||||||.|||||.|
BPUM_0099___t 651 GGACGTATTCTCAATCACTGGTCGTGGAACAGTTGCTACTGGTCGTGTTG 700
BSNT_00216___ 701 AACGCGGACAAGTTAAAGTCGGTGACGAAGTTGAAATCATCGGTCTTCAA 750
|.||.|||||||||||||||||||||||||||||||||||||||||||||
BPUM_0099___t 701 AGCGTGGACAAGTTAAAGTCGGTGACGAAGTTGAAATCATCGGTCTTCAA 750
BSNT_00216___ 751 GAAGAGAACAAGAAAACAACTGTTACAGGTGTTGAAATGTTCCGTAAGCT 800
|||||.|||...||||||||||||||||||||||||||||||||||||||
BPUM_0099___t 751 GAAGAAAACGGTAAAACAACTGTTACAGGTGTTGAAATGTTCCGTAAGCT 800
BSNT_00216___ 801 TCTTGATTACGCTGAAGCTGGTGACAACATTGGTGCCCTTCTTCGCGGTG 850
||||||.||.||||||||||||||||||||.|||||.||.|||||.||||
BPUM_0099___t 801 TCTTGACTATGCTGAAGCTGGTGACAACATCGGTGCACTACTTCGTGGTG 850
BSNT_00216___ 851 TATCTCGTGAAGAAATCCAACGTGGTCAAGTACTTGCTAAACCAGGTACA 900
|||||||||||||.||||||||||||||||||||||||||||||||||||
BPUM_0099___t 851 TATCTCGTGAAGATATCCAACGTGGTCAAGTACTTGCTAAACCAGGTACA 900
BSNT_00216___ 901 ATCACTCCACACAGCAAATTCAAAGCTGAAGTTTACGTTCTTTCTAAAGA 950
|||||||||||.|||...|||||||||||||||||.||.|||||||||||
BPUM_0099___t 901 ATCACTCCACATAGCCGTTTCAAAGCTGAAGTTTATGTACTTTCTAAAGA 950
BSNT_00216___ 951 AGAGGGTGGACGTCATACTCCATTCTTCTCTAACTACCGTCCTCAGTTCT 1000
||||||||||||||||||||||||||||.|||||||||||||.|||||||
BPUM_0099___t 951 AGAGGGTGGACGTCATACTCCATTCTTCGCTAACTACCGTCCGCAGTTCT 1000
BSNT_00216___ 1001 ACTTCCGTACAACTGACGTAACTGGTATCATCCATCTTCCAGAAGGCGTA 1050
|||||||||||||||||||||||||||||.|.||||||||||||| |||
BPUM_0099___t 1001 ACTTCCGTACAACTGACGTAACTGGTATCGTACATCTTCCAGAAG--GTA 1048
BSNT_00216___ 1051 --GAAATGGTTATGCCTGGAGATAACACTGAAATGAACGTTGAACTTATT 1098
|||||||||||||||||.|||||||||||.|||.|.|||||||||||.
BPUM_0099___t 1049 CTGAAATGGTTATGCCTGGCGATAACACTGAGATGGAAGTTGAACTTATC 1098
BSNT_00216___ 1099 TCTACAATCGCTATCGAAGAAGGAACTCGTTTCTCTATTCGTGAAGGCGG 1148
|||||.||||||||||||||||||||||||||||||||.|||||.||.||
BPUM_0099___t 1099 TCTACTATCGCTATCGAAGAAGGAACTCGTTTCTCTATCCGTGAGGGTGG 1148
BSNT_00216___ 1149 ACGTACTGTTGGTTCAGGCGTTGTTTCTACAATCACTGAGTAA 1191
|||||||||.|||||.|||||.|||||..|.||||.|.|||||
BPUM_0099___t 1149 ACGTACTGTAGGTTCTGGCGTCGTTTCATCTATCATTAAGTAA 1191
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