Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00214 and BPUM_0097

See Amino acid alignment / Visit BSNT_00214 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:09
# Commandline: needle
#    -asequence dna-align/BSNT_00214___rpsG.1.24716.seq
#    -bsequence dna-align/BPUM_0097___rpsG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00214___rpsG-BPUM_0097___rpsG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00214___rpsG-BPUM_0097___rpsG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00214___rpsG
# 2: BPUM_0097___rpsG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 471
# Identity:     424/471 (90.0%)
# Similarity:   424/471 (90.0%)
# Gaps:           0/471 ( 0.0%)
# Score: 1932.0
# 
#
#=======================================

BSNT_00214___      1 ATGCCACGTAAAGGTCCTGTAGCAAAAAGAGATGTTTTACCTGATCCGAT     50
                     ||||||||||||||||||||||||||||||||.||.||.||.|||||.||
BPUM_0097___r      1 ATGCCACGTAAAGGTCCTGTAGCAAAAAGAGACGTATTGCCAGATCCAAT     50

BSNT_00214___     51 TTACAACTCTAAGCTTGTATCTCGTCTAATCAACAAAATGATGATCGATG    100
                     ||||||.|||||.||||||||||||.|.||||||||||||||||||||.|
BPUM_0097___r     51 TTACAATTCTAAACTTGTATCTCGTTTGATCAACAAAATGATGATCGACG    100

BSNT_00214___    101 GTAAAAAAGGTAAGTCTCAAACAATCCTATACAAGTCATTCGATATCATT    150
                     ||||||.|||.|||||.|||||.||.||.|||||||||||.||||||||.
BPUM_0097___r    101 GTAAAAGAGGAAAGTCACAAACTATTCTCTACAAGTCATTTGATATCATC    150

BSNT_00214___    151 AAAGAACGTACTGGCAATGATGCAATGGAGGTTTTCGAACAAGCATTGAA    200
                     ||||||||||||||.|||||.||.||||||||||||||||||||.|||||
BPUM_0097___r    151 AAAGAACGTACTGGTAATGAAGCGATGGAGGTTTTCGAACAAGCCTTGAA    200

BSNT_00214___    201 AAACATCATGCCTGTACTTGAAGTAAAAGCACGCCGTGTAGGTGGTGCGA    250
                     ||||||||||||.||.||||||||.||||||||.|||||||||||.||.|
BPUM_0097___r    201 AAACATCATGCCAGTTCTTGAAGTTAAAGCACGTCGTGTAGGTGGAGCTA    250

BSNT_00214___    251 ACTACCAAGTTCCTGTAGAAGTTCGTCCTGAACGTCGTACGACTCTTGGA    300
                     |||||||||||||||||||||||||.||.||.||||||||||||.|.||.
BPUM_0097___r    251 ACTACCAAGTTCCTGTAGAAGTTCGCCCAGACCGTCGTACGACTTTAGGT    300

BSNT_00214___    301 CTTCGCTGGTTAGTTAACTACGCTCGTCTTCGCGGAGAAAAAACGATGGA    350
                     ||||||||||||||.|||||||||||||||||.|||||||||||||||||
BPUM_0097___r    301 CTTCGCTGGTTAGTAAACTACGCTCGTCTTCGTGGAGAAAAAACGATGGA    350

BSNT_00214___    351 AGAGCGTTTAGCTAACGAAATCCTTGACGCAGCTAACAACACTGGTGCTG    400
                     |||||||.|.||||||||||||||||||||||||||||||||||||||||
BPUM_0097___r    351 AGAGCGTCTTGCTAACGAAATCCTTGACGCAGCTAACAACACTGGTGCTG    400

BSNT_00214___    401 CTGTTAAGAAACGTGAAGACACTCATAAGATGGCTGAAGCAAACAAAGCA    450
                     |||||||||||||||||||.||.||.||.|||||.|||||.|||||||||
BPUM_0097___r    401 CTGTTAAGAAACGTGAAGATACACACAAAATGGCAGAAGCGAACAAAGCA    450

BSNT_00214___    451 TTTGCTCACTATCGTTGGTAG    471
                     ||.||||||||.||.||||||
BPUM_0097___r    451 TTCGCTCACTACCGCTGGTAG    471


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