Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00213 and BPUM_0096
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:09
# Commandline: needle
# -asequence dna-align/BSNT_00213___rpsL.1.24716.seq
# -bsequence dna-align/BPUM_0096___rpsL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00213___rpsL-BPUM_0096___rpsL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00213___rpsL-BPUM_0096___rpsL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00213___rpsL
# 2: BPUM_0096___rpsL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 423
# Identity: 374/423 (88.4%)
# Similarity: 374/423 (88.4%)
# Gaps: 9/423 ( 2.1%)
# Score: 1677.0
#
#
#=======================================
BSNT_00213___ 1 ATGCCTACAATTAATCAGCTAATTCGCAAAGGACGCGTGAGTAAAGTAGA 50
|||||||||||||||||||||||.|||||||||||||||||||||||.||
BPUM_0096___r 1 ATGCCTACAATTAATCAGCTAATACGCAAAGGACGCGTGAGTAAAGTTGA 50
BSNT_00213___ 51 AAACTCAAAGTCTCCTGCACTTAACAAAGGATACAACAGCTTTAAAAAAG 100
|||||||||||||||||||||||||||||||||||||||.||.|||||||
BPUM_0096___r 51 AAACTCAAAGTCTCCTGCACTTAACAAAGGATACAACAGTTTCAAAAAAG 100
BSNT_00213___ 101 AGCACACTAACGTATCTTCTCCACAAAAACGCGGGGTATGTACTCGTGTT 150
||||||||||||||.|.||||||||.||.||||||||.|||||||||||.
BPUM_0096___r 101 AGCACACTAACGTAACATCTCCACAGAAGCGCGGGGTTTGTACTCGTGTC 150
BSNT_00213___ 151 GGTACAATGACACCGAAAAAACCGAACTCAGCACTTCGTAAATATGCTCG 200
||.||||||||||||||||||||.|||||||||||.||||||||||||||
BPUM_0096___r 151 GGCACAATGACACCGAAAAAACCAAACTCAGCACTACGTAAATATGCTCG 200
BSNT_00213___ 201 TGTTCGTTTGACTAACGGAATCGAGGTTACTGCTTACATTCCTGGTATCG 250
|||.||||||.|||||...||.|||||.||.|||||||||||||||||||
BPUM_0096___r 201 TGTACGTTTGTCTAACCTGATTGAGGTAACAGCTTACATTCCTGGTATCG 250
BSNT_00213___ 251 GTCACAACCTGCAAGAGCACAGTGTTGTACTTATCCGCGGCGGACGTGTA 300
|.||.||.||.||||||||||||||.|||||||||||.||||||||||||
BPUM_0096___r 251 GACATAATCTACAAGAGCACAGTGTAGTACTTATCCGTGGCGGACGTGTA 300
BSNT_00213___ 301 AAAGACTTACCAGGGGTACGTTACCACATCGTTCGTGGTGCGCTTGATAC 350
|||||||||||.||.|||||||||||||||||||||||||||||||||||
BPUM_0096___r 301 AAAGACTTACCGGGTGTACGTTACCACATCGTTCGTGGTGCGCTTGATAC 350
BSNT_00213___ 351 TGCTGGAGTTGAAAACCGTGCACAAGGCCGTTCTAAATACGGTACGAAA- 399
|||.||||||||....|||...|||||.||||||||||||||.||.|||
BPUM_0096___r 351 TGCCGGAGTTGACGGTCGTATGCAAGGACGTTCTAAATACGGAACAAAAC 400
BSNT_00213___ 400 -----AAACCTAAAGCAAAATAA 417
|||| ||||| ||||||
BPUM_0096___r 401 GCCCTAAAC--AAAGC-AAATAA 420
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