Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00206 and BPUM_0090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:08
# Commandline: needle
# -asequence dna-align/BSNT_00206___rplL.1.24716.seq
# -bsequence dna-align/BPUM_0090___rplL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00206___rplL-BPUM_0090___rplL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00206___rplL-BPUM_0090___rplL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00206___rplL
# 2: BPUM_0090___rplL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity: 339/372 (91.1%)
# Similarity: 339/372 (91.1%)
# Gaps: 6/372 ( 1.6%)
# Score: 1574.5
#
#
#=======================================
BSNT_00206___ 1 ATGGCTTTAAATATCGAAGAAATCATTGCTTCCGTTAAAGAAGCAACTGT 50
||||||||||||||||||||||||||||||||.|||||||||||||||||
BPUM_0090___r 1 ATGGCTTTAAATATCGAAGAAATCATTGCTTCAGTTAAAGAAGCAACTGT 50
BSNT_00206___ 51 ACTTGAATTGAACGACCTAGTAAAAGCAATCGAAGAAGAATTTGGCGTAA 100
||||||.||.||||||.|||||||||||||||||||||||||||||||||
BPUM_0090___r 51 ACTTGAGTTAAACGACTTAGTAAAAGCAATCGAAGAAGAATTTGGCGTAA 100
BSNT_00206___ 101 CTGCTGCTGCTCCTGTAGCTGTAGCTGGCGGAGCTGCTGCAGGCGGAGCT 150
|||||||||||||||||||||||||| |||||||..||.|..|||
BPUM_0090___r 101 CTGCTGCTGCTCCTGTAGCTGTAGCT------GCTGCTGGCGGTGCTGCT 144
BSNT_00206___ 151 GCTGAAGAGCAAAGCGAATTCGATCTTATCCTTGCTGGTGCAGGATCTCA 200
||||||||..|||..||.||.|||||..|.|||||||||||.|||...||
BPUM_0090___r 145 GCTGAAGAAAAAACTGATTTTGATCTAGTACTTGCTGGTGCTGGAGACCA 194
BSNT_00206___ 201 AAAAATCAAAGTTATCAAAGTTGTACGTGAAATCACTGGTCTTGGCTTGA 250
|||||||||||||||||||||.||.|||||||||||||||||||||||.|
BPUM_0090___r 195 AAAAATCAAAGTTATCAAAGTGGTTCGTGAAATCACTGGTCTTGGCTTAA 244
BSNT_00206___ 251 AAGAAGCTAAAGAACTTGTTGACAACACTCCAAAACCACTTAAAGAAGGT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0090___r 245 AAGAAGCTAAAGAACTTGTTGACAACACTCCAAAACCACTTAAAGAAGGT 294
BSNT_00206___ 301 ATTGCTAAAGAAGAAGCTGAAGAGCTTAAAGCTAAACTTGAAGAAGTTGG 350
|||||||||||||||||||||||.|||||||||||.||||||||||||||
BPUM_0090___r 295 ATTGCTAAAGAAGAAGCTGAAGAACTTAAAGCTAAGCTTGAAGAAGTTGG 344
BSNT_00206___ 351 CGCTTCTGTAGAAGTTAAGTAA 372
||||||||||||||||||||||
BPUM_0090___r 345 CGCTTCTGTAGAAGTTAAGTAA 366
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